RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ZNF175Q9Y473 711 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 RAD54L2Q9Y4B4 1467 aa3.41□□□□□ -1.86
SMCHD1-213ENST00000609587 A0A0A6YYD4 124 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 FOXI3A8MTJ6 420 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 CYB561D2O14569 222 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 NDC80O14777 642 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 SSX5O60225 188 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 GSTA1P08263 222 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 PRDX6P30041 224 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 MAT2AP31153 395 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 AKT2P31751 481 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 HSPA1LP34931 641 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 TNNT2P45379 298 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 SLC7A2P52569 658 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 MYBPC1Q00872 1141 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 ZFP36L1Q07352 338 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 CYLC2Q14093 348 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 ANKDD1AQ495B1 522 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 AGKQ53H12 422 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 VWA2Q5GFL6 755 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 LIPKQ5VXJ0 399 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 RFWD3Q6PCD5 774 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 MOB2Q70IA6 237 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 ELMOD2Q8IZ81 293 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 KDM8Q8N371 416 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 IPMKQ8NFU5 416 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 PTPRUQ92729 1446 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 GSDMAQ96QA5 445 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 C19orf43Q9BQ61 176 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 ATG10Q9H0Y0 220 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 PNNQ9H307 717 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 RNF41Q9H4P4 317 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 FAM124BQ9H5Z6 455 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 NRN1Q9NPD7 142 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 UTP6Q9NYH9 597 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 EXTL2Q9UBQ6 330 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 CLIP2Q9UDT6 1046 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 MIOXQ9UGB7 285 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 CIDEBQ9UHD4 219 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 KLHDC2Q9Y2U9 406 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 ZMYM6O95789 1325 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 CACNA1FO60840 1977 aa3.4□□□□□ -1.87
SMCHD1-213ENST00000609587 PCNX3Q9H6A9 2034 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 IGKV3D-20A0A0C4DH25 116 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 ERICH4A6NGS2 130 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 EI24O14681 340 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 MCF2LO15068 1137 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 BUB1O43683 1085 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 SH3BGRLO75368 114 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 GUCA1CO95843 209 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 RENP00797 406 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 OAS1P00973 400 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 IL10P22301 178 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 UCP1P25874 307 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 MAPK3P27361 379 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 MAGEA4P43358 317 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 SLC6A8P48029 635 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 ZNF528Q3MIS6 628 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 TOR1AIP1Q5JTV8 583 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 IL23RQ5VWK5 629 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 SEL1L3Q68CR1 1132 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 REG3GQ6UW15 175 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 OLFM4Q6UX06 510 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 APOOLQ6UXV4 268 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 DPY19L2P2Q6ZN68 376 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 ZNF491Q8N8L2 437 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 MRPL43Q8N983 215 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 BIRC7Q96CA5 298 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 CPXM1Q96SM3 734 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 ST6GALNAC5Q9BVH7 336 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 GPR174Q9BXC1 333 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 NT5C3AQ9H0P0 336 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 C1orf21Q9H246 121 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 RPAP3Q9H6T3 665 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 ABCC13Q9NSE7 274 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 NINJ2Q9NZG7 142 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 HOOK1Q9UJC3 728 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 EMCNQ9ULC0 261 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 PLA2G4CQ9UP65 541 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 PIN4Q9Y237 131 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 CSAG2Q9Y5P2 127 aa3.39□□□□□ -1.87
SMCHD1-213ENST00000609587 NPIPA5A0A0B4J1W7 369 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 NPIPA5E9PKD4 350 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 KLHL41O60662 606 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 PALMO75781 387 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 HPP00738 406 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 TGFAP01135 160 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 MELTFP08582 738 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 RALAP11233 206 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 FOLR2P14207 255 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 GATA2P23769 480 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 RABIFP47224 123 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 SGSHP51688 502 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 ARFIP1P53367 373 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 ATXN3P54252 364 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 TRA2BP62995 288 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 MRPL28Q13084 256 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 TCTEX1D4Q5JR98 221 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 NHLRC3Q5JS37 347 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms