RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ZNF844Q08AG5 666 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 ZNF750Q32MQ0 723 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 C6orf163Q5TEZ5 329 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 SHEQ5VZ18 495 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 FBXW10Q5XX13 1052 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 CLEC6AQ6EIG7 209 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 B3GNT6Q6ZMB0 384 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 RGS9BPQ6ZS82 235 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 SLC29A4Q7RTT9 530 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 MDGA2Q7Z553 956 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 SULF2Q8IWU5 870 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 GALNT12Q8IXK2 581 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 GPALPP1Q8IXQ4 340 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 WFDC11Q8NEX6 87 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 FAM222BQ8WU58 562 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 KLHL29Q96CT2 875 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 MECRQ9BV79 373 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 CXorf21Q9HAI6 301 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 TIMMDC1Q9NPL8 285 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 CES1P1Q9UKY3 287 aa17.69■□□□□ 0.42
SGMS1-208ENST00000608287 RGS16O15492 202 aaPredicted RBP17.68■□□□□ 0.42
SGMS1-208ENST00000608287 PEX1O43933 1283 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 GOSR1O95249 250 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 IL3P08700 152 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 TIA1P31483 386 aaKnown RBP eCLIP17.68■□□□□ 0.425e-6■□□□□ 8.4
SGMS1-208ENST00000608287 FEN1P39748 380 aaKnown RBP17.68■□□□□ 0.42
SGMS1-208ENST00000608287 NUBPLQ8TB37 319 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 GAL3ST4Q96RP7 486 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 TRMOQ9BU70 441 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 EBPLQ9BY08 206 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 SENP1Q9P0U3 644 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 DLGAP4Q9Y2H0 992 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 FIS1Q9Y3D6 152 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 HRH3Q9Y5N1 445 aa17.68■□□□□ 0.42
SGMS1-208ENST00000608287 OR6C76A6NM76 312 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 CT62P0C5K7 136 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 CSNK2A2P19784 350 aaPredicted RBP17.67■□□□□ 0.42
SGMS1-208ENST00000608287 SSTR4P31391 388 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 SLC37A1P57057 533 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 GPR85P60893 370 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 MPEG1Q2M385 716 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 GXYLT1Q4G148 440 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 FLYWCH1Q4VC44 716 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 PIGGQ5H8A4 983 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 FAM180BQ6P0A1 224 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 OPN5Q6U736 354 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 TRIM46Q7Z4K8 759 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 PSD4Q8NDX1 1056 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 SLC22A8Q8TCC7 542 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 C16orf78Q8WTQ4 265 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 SMR3AQ99954 134 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 TTYH2Q9BSA4 534 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 ZNF395Q9H8N7 513 aaPredicted RBP17.67■□□□□ 0.42
SGMS1-208ENST00000608287 RRAGDQ9NQL2 400 aaPredicted RBP17.67■□□□□ 0.42
SGMS1-208ENST00000608287 PFDN4Q9NQP4 134 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 HEY2Q9UBP5 337 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 ZNF780BQ9Y6R6 833 aa17.67■□□□□ 0.42
SGMS1-208ENST00000608287 FN1P02751 2386 aaKnown RBP17.67■□□□□ 0.42
SGMS1-208ENST00000608287 AZIN1O14977 448 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 ARHGEF9O43307 516 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 ZNF354AO60765 605 aaPredicted RBP17.66■□□□□ 0.42
SGMS1-208ENST00000608287 CLPSP04118 112 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 ANXA4P09525 319 aaPredicted RBP17.66■□□□□ 0.42
SGMS1-208ENST00000608287 HOXC12P31275 282 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 DLX5P56178 289 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 PPP2R2BQ00005 443 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 CEP85LQ5SZL2 805 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 GALNT18Q6P9A2 607 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 PRIMA1Q86XR5 153 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 RPRMLQ8N4K4 120 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 CDC26Q8NHZ8 85 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 C11orf24Q96F05 449 aaPredicted RBP17.66■□□□□ 0.42
SGMS1-208ENST00000608287 ZIM3Q96PE6 472 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 BRINP2Q9C0B6 783 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 WWTR1Q9GZV5 400 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 FOXD3Q9UJU5 478 aaPredicted RBP17.66■□□□□ 0.42
SGMS1-208ENST00000608287 UTS2RQ9UKP6 389 aa17.66■□□□□ 0.42
SGMS1-208ENST00000608287 C2orf92A0A1B0GVN3 265 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 KIAA1324LA8MWY0 1029 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-208ENST00000608287 NPIPA2E9PIF3 369 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 NPIPA3F8WFD2 350 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 TYROBPO43914 113 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 NPHS1O60500 1241 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 WDR1O75083 606 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 RSL1D1O76021 490 aaKnown RBP17.65■□□□□ 0.42
SGMS1-208ENST00000608287 ATE1O95260 518 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 CHEK2O96017 543 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 CHRNGP07510 517 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 RFC3P40938 356 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 FUT7Q11130 342 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 HEPACAMQ14CZ8 416 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 EBPQ15125 230 aaKnown RBP17.65■□□□□ 0.42
SGMS1-208ENST00000608287 EMC4Q5J8M3 183 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 RTL4Q6ZR62 310 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 ZCCHC23Q6ZST2 131 aa17.65■□□□□ 0.42
SGMS1-208ENST00000608287 WDR53Q7Z5U6 358 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-208ENST00000608287 EXOSC8Q96B26 276 aaKnown RBP17.65■□□□□ 0.42
SGMS1-208ENST00000608287 CNRIP1Q96F85 164 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms