RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IL6P05231 212 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 NAGAP17050 411 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 S100A3P33764 101 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 ATP4BP51164 291 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 PHC1P78364 1004 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 OC90Q02509 493 aaPredicted RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 OR1C1Q15619 314 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 SPANXN4Q5MJ08 99 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 ZNF468Q5VIY5 522 aaPredicted RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 OR4F3Q6IEY1 312 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 RPUSD3Q6P087 351 aaKnown RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 PTRH1Q86Y79 214 aaKnown RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 ZNF843Q8N446 348 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 MDS2Q8NDY4 140 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 HSPBAP1Q96EW2 488 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 LCORQ96JN0 433 aaPredicted RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 VSTM2LQ96N03 204 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 MFRPQ9BY79 579 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 SIRT3Q9NTG7 399 aaPredicted RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 FAM120CQ9NX05 1096 aaKnown RBP12.83□□□□□ -0.36
RNF40-212ENST00000602784 LRFN1Q9P244 771 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 TRIM33Q9UPN9 1127 aa12.83□□□□□ -0.36
RNF40-212ENST00000602784 PRRC2CQ9Y520 2896 aaKnown RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 A0A0G2JND7 137 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 FRG2CA6NGY1 282 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 A8MVJ9 347 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 CAPN14A8MX76 684 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 B8ZZF3 427 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 EMC8O43402 210 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SUV39H1O43463 412 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ZNF354AO60765 605 aaPredicted RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 C1QL1O75973 258 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SORBS2O94875 1100 aaKnown RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 OR6B1O95007 311 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 F10P00742 488 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 PGRP06401 933 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 FBXO45P0C2W1 286 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 CD46P15529 392 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 IL12AP29459 219 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SOX3P41225 446 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 CDK9P50750 372 aaKnown RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 NR0B1P51843 470 aaKnown RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 NME5P56597 212 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 NRG3P56975 720 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 STX1BP61266 288 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 PRR5P85299 388 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 SPINK14Q6IE38 97 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ZCCHC12Q6PEW1 402 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 TMEM64Q6YI46 380 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ZNF227Q86WZ6 799 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 Q8NA96 180 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 GOLM1Q8NBJ4 401 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SFXN5Q8TD22 340 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 HOXB13Q92826 284 aaPredicted RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 MOAP1Q96BY2 351 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SPACA9Q96E40 222 aaPredicted RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SCMH1Q96GD3 660 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 MARK4Q96L34 752 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 RILPQ96NA2 401 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 SIGLEC12Q96PQ1 595 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ITPAQ9BY32 194 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 NXF5Q9H1B4 397 aaKnown RBP12.82□□□□□ -0.36
RNF40-212ENST00000602784 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ANKRA2Q9H9E1 313 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 FOLH1BQ9HBA9 442 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 MRGBPQ9NV56 204 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 ANKRD10Q9NXR5 420 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 FAM53CQ9NYF3 392 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 BTNL2Q9UIR0 455 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 DTX4Q9Y2E6 619 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
RNF40-212ENST00000602784 FAM234BA2RU67 622 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 ERN1O75460 977 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 SLC25A12O75746 678 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 SOX30O94993 753 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 C6orf47O95873 294 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 PRB1P04280 392 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 SP1P08047 785 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 CT45A8P0DMV1 189 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 CT45A9P0DMV2 189 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 EFNA1P20827 205 aaPredicted RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 MAP3K8P41279 467 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 CCT3P49368 545 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 TMED10P49755 219 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 POLR2JP52435 117 aaKnown RBP12.81□□□□□ -0.36
RNF40-212ENST00000602784 HBA1P69905 142 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 INAQ16352 499 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 CT45A2Q5DJT8 189 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 ZNF766Q5HY98 468 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 SLC25A25Q6KCM7 469 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 CGB2Q6NT52 195 aa12.81□□□□□ -0.36
RNF40-212ENST00000602784 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms