RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ERMP1Q7Z2K6 904 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 GALNT10Q86SR1 603 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 GLRX5Q86SX6 157 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 PRSS58Q8IYP2 241 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 FAM86B1Q8N7N1 296 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 OR52R1Q8NGF1 315 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 STT3BQ8TCJ2 826 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 LRTOMTQ8WZ04 291 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 LZICQ8WZA0 190 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 SLC9A6Q92581 669 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 OTUB1Q96FW1 271 aaPredicted RBP16.8■□□□□ 0.28
VRK3-225ENST00000601912 ZNF607Q96SK3 696 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 VCX3BQ9H321 246 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 CALML5Q9NZT1 146 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 IFT80Q9P2H3 777 aaPredicted RBP16.8■□□□□ 0.28
VRK3-225ENST00000601912 ZNF639Q9UID6 485 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 PRDM4Q9UKN5 801 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 GCM2O75603 506 aaPredicted RBP16.79■□□□□ 0.28
VRK3-225ENST00000601912 MT-CO3P00414 261 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 ALOX5P09917 674 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 ZGLP1P0C6A0 271 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 VHLP40337 213 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 PGDP52209 483 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 SELENOWP63302 87 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 TRIP10Q15642 601 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 SYPL1Q16563 259 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 DCAF12Q5T6F0 453 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 ZNF385CQ66K41 422 aaPredicted RBP16.79■□□□□ 0.28
VRK3-225ENST00000601912 FKBP9P1Q75LS8 142 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 RAB11FIP2Q7L804 512 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 C16orf62Q7Z3J2 963 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 LILRA2Q8N149 483 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 SLC16A11Q8NCK7 471 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 SIMC1Q8NDZ2 872 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 PLPP5Q8NEB5 264 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 TPD52L3Q96J77 140 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 LRFN5Q96NI6 719 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 DEPDC7Q96QD5 511 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 CNPPD1Q9BV87 410 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 VN1R1Q9GZP7 353 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 PNO1Q9NRX1 252 aaKnown RBP16.79■□□□□ 0.28
VRK3-225ENST00000601912 RIMS3Q9UJD0 308 aa16.79■□□□□ 0.28
VRK3-225ENST00000601912 TCRBV16S1A1N1A0A5B0 115 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 C17orf105B2RV13 164 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 PRAMEF2O60811 474 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 CSO75390 466 aaKnown RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 SERPINB7O75635 380 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 CBX7O95931 251 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 ALBP02768 609 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 S1PR1P21453 382 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 GPAT3Q53EU6 434 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 PRAMEF8Q5VWM4 474 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 PRAMEF7Q5VXH5 474 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 KRT73Q86Y46 540 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TMEM151BQ8IW70 566 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 BBS10Q8TAM1 723 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 FAM110BQ8TC76 370 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TSLPQ969D9 159 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 SLC35A4Q96G79 324 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 LIN37Q96GY3 246 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 STACQ99469 402 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TREX2Q9BQ50 279 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 ZPBPQ9BS86 351 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 DOHHQ9BU89 302 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 PIGUQ9H490 435 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 BCL2L10Q9HD36 194 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TOR4AQ9NXH8 423 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 PCDHGA8Q9Y5G5 932 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 CLCA3PQ9Y6N3 262 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 FER1L5A0AVI2 2057 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 CASQ2O14958 399 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 JMJD7P0C870 316 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 HPCAP84074 193 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 FUT7Q11130 342 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 ZNF155Q12901 538 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 EIF3IQ13347 325 aaKnown RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 ZNHIT3Q15649 155 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 ELAVL1Q15717 326 aaKnown RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 RPS26P11Q5JNZ5 115 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 DHRS13Q6UX07 377 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 LAPTM4BQ86VI4 370 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 ANKFN1Q8N957 763 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TMEM102Q8N9M5 508 aaPredicted RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 OR7G1Q8NGA0 311 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 OR10Q1Q8NGQ4 319 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 NRG4Q8WWG1 115 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 RASSF5Q8WWW0 418 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 FKBP10Q96AY3 582 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TAMM41Q96BW9 452 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 HSH2DQ96JZ2 352 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 TRNT1Q96Q11 434 aaKnown RBP16.78■□□□□ 0.28
VRK3-225ENST00000601912 SPATA5L1Q9BVQ7 753 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 DUSP22Q9NRW4 184 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 AGPAT4Q9NRZ5 378 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 ERVK-19Q9WJR5 959 aa16.78■□□□□ 0.28
VRK3-225ENST00000601912 EP300Q09472 2414 aaPredicted RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 A0A0G2JPF8 293 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms