RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 DNASE1L1P49184 302 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 NCBP2P52298 156 aaKnown RBP eCLIP14.49□□□□□ -0.09
RPS28-203ENST00000600659 HSF1Q00613 529 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 PTGR1Q14914 329 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 PDCD2Q16342 344 aaPredicted RBP14.49□□□□□ -0.09
RPS28-203ENST00000600659 CT45A2Q5DJT8 189 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 C6orf163Q5TEZ5 329 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 DESI1Q6ICB0 168 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 NPSR1Q6W5P4 371 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 PRR22Q8IZ63 422 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 FBXW8Q8N3Y1 598 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 LIX1Q8N485 282 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 MGARPQ8TDB4 240 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 CIDECQ96AQ7 238 aaPredicted RBP14.49□□□□□ -0.09
RPS28-203ENST00000600659 C1orf50Q9BV19 199 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 TTTY12Q9BZ98 90 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 PFDN4Q9NQP4 134 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 PLSCR2Q9NRY7 297 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 GIMAP4Q9NUV9 329 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 PNPOQ9NVS9 261 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 SEC14L3Q9UDX4 400 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 NPIPA1Q9UND3 350 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 NPFFR2Q9Y5X5 522 aa14.49□□□□□ -0.09
RPS28-203ENST00000600659 A0A087WV62 115 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 WIPF3A6NGB9 483 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 LRRC3CA6NJW4 275 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 PLOD2O00469 737 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 TO15178 435 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 AKAP10O43572 662 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 ASNA1O43681 348 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 HS6ST1O60243 411 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 CNR1P21554 472 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 MPIP34949 423 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 MC3RP41968 323 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 RPL14P50914 215 aaKnown RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 FBXW4P57775 412 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 STX3Q13277 289 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 RPS6KA2Q15349 733 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 ATP6AP1LQ52LC2 224 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 PRAMEF20Q5VT98 475 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 HHATQ5VTY9 493 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 TMEM107Q6UX40 140 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 GFRALQ6UXV0 394 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 ZNF551Q7Z340 670 aaPredicted RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 DND1Q8IYX4 353 aaKnown RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 TAGAPQ8N103 731 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 OR2L13Q8N349 312 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 OR52N2Q8NGI0 321 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 HGDQ93099 445 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 LCORQ96JN0 433 aaPredicted RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 BTBD9Q96Q07 612 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 BBS4Q96RK4 519 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 ZDHHC11Q9H8X9 412 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 SACM1LQ9NTJ5 587 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 ASIC5Q9NY37 505 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 TUBA8Q9NY65 449 aaPredicted RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 ATP6V1HQ9UI12 483 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 OSGIN2Q9Y236 505 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 CFL2Q9Y281 166 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 ZNF835Q9Y2P0 537 aa14.48□□□□□ -0.09
RPS28-203ENST00000600659 GPR55Q9Y2T6 319 aaPredicted RBP14.48□□□□□ -0.09
RPS28-203ENST00000600659 FRG2CA6NGY1 282 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 UPK1AO00322 258 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 SCAMP2O15127 329 aaKnown RBP14.47□□□□□ -0.09
RPS28-203ENST00000600659 SASH3O75995 380 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 SNUPNO95149 360 aaKnown RBP14.47□□□□□ -0.09
RPS28-203ENST00000600659 LDLRP01130 860 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 IFI6P09912 130 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 NTSP30990 170 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 PPICP45877 212 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 CORO7P57737 925 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 PSG6Q00889 435 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 OCRLQ01968 901 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 ELOAQ14241 798 aaKnown RBP14.47□□□□□ -0.09
RPS28-203ENST00000600659 HYAL4Q2M3T9 481 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 KRTCAP3Q53RY4 240 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 IL23RQ5VWK5 629 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 HLA-DQA1Q5Y7H0 255 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 SLC22A10Q63ZE4 541 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 BICRALQ6AI39 1079 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 RIMKLAQ8IXN7 391 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 FNDC5Q8NAU1 212 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 SPPL2AQ8TCT8 520 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 TUBGCP3Q96CW5 907 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 MTERF3Q96E29 417 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 ELP4Q96EB1 424 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 FAM173AQ9BQD7 235 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 AKTIPQ9H8T0 292 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 FOLH1BQ9HBA9 442 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 PRODH2Q9UF12 536 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 C19orf53Q9UNZ5 99 aaPredicted RBP14.47□□□□□ -0.09
RPS28-203ENST00000600659 HRH3Q9Y5N1 445 aa14.47□□□□□ -0.09
RPS28-203ENST00000600659 MED12Q93074 2177 aa14.46□□□□□ -0.09
RPS28-203ENST00000600659 ADAM10O14672 748 aa14.46□□□□□ -0.09
RPS28-203ENST00000600659 ACOX3O15254 700 aa14.46□□□□□ -0.09
RPS28-203ENST00000600659 PDPK1O15530 556 aa14.46□□□□□ -0.09
RPS28-203ENST00000600659 PPM1BO75688 479 aa14.46□□□□□ -0.09
RPS28-203ENST00000600659 BCAS2O75934 225 aaPredicted RBP14.46□□□□□ -0.09
RPS28-203ENST00000600659 SLITRK5O94991 958 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms