RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PRTFDC1Q9NRG1 225 aa18.77■□□□□ 0.6
PNKP-214ENST00000600573 SRPK3Q9UPE1 567 aa18.77■□□□□ 0.6
PNKP-214ENST00000600573 MMACHCQ9Y4U1 282 aa18.77■□□□□ 0.6
PNKP-214ENST00000600573 MYOCOSA0A1B0GUC4 107 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 ZNF749O43361 778 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 LDB3O75112 727 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 MED26O95402 600 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 FOLR1P15328 257 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 MAN2A2P49641 1150 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 KCNC4Q03721 635 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 KCNAB1Q14722 419 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 LTB4RQ15722 352 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 PRICKLE4Q2TBC4 344 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 RPS26P11Q5JNZ5 115 aaPredicted RBP18.76■□□□□ 0.59
PNKP-214ENST00000600573 MFSD12Q6NUT3 480 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 ZNF786Q8N393 782 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 TSPAN14Q8NG11 270 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 OR51Q1Q8NH59 317 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 OR1L3Q8NH93 324 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 CTHRC1Q96CG8 243 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 ZNF501Q96CX3 271 aaPredicted RBP18.76■□□□□ 0.59
PNKP-214ENST00000600573 PEX11GQ96HA9 241 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 TRNT1Q96Q11 434 aaKnown RBP18.76■□□□□ 0.59
PNKP-214ENST00000600573 OR7D2Q96RA2 312 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 GTPBP2Q9BX10 602 aaKnown RBP18.76■□□□□ 0.59
PNKP-214ENST00000600573 TRIM45Q9H8W5 580 aaPredicted RBP18.76■□□□□ 0.59
PNKP-214ENST00000600573 FAM118AQ9NWS6 357 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 NDUFAF4Q9P032 175 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 HCN3Q9P1Z3 774 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 KIF17Q9P2E2 1029 aa18.76■□□□□ 0.59
PNKP-214ENST00000600573 TMEFF2Q9UIK5 374 aaPredicted RBP18.76■□□□□ 0.59
PNKP-214ENST00000600573 A0A1W2PS29 197 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 A8MU76 341 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 DSCR3O14972 297 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 OR10H2O60403 315 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 COQ9O75208 318 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 MFN2O95140 757 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 ITGAMP11215 1152 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 CDH2P19022 906 aaPredicted RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 RPL5P46777 297 aaKnown RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 SLC13A2Q13183 592 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 FHL5Q5TD97 284 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 DBX2Q6ZNG2 339 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 SLC44A2Q8IWA5 706 aaPredicted RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 CDRT4Q8N9R6 151 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 IFI44Q8TCB0 444 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 PMM1Q92871 262 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 ZNF300Q96RE9 604 aaPredicted RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 TREX2Q9BQ50 279 aaPredicted RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 YTHDF1Q9BYJ9 559 aaKnown RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 FGF21Q9NSA1 209 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 PDP1Q9P0J1 537 aaPredicted RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 GPC6Q9Y625 555 aaPredicted RBP18.75■□□□□ 0.59
PNKP-214ENST00000600573 NCOR1O75376 2440 aa18.75■□□□□ 0.59
PNKP-214ENST00000600573 A0A1W2PQM1 296 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 DNAJB5O75953 348 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 CLIC3O95833 236 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 AK1P00568 194 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 CD247P20963 164 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 PRKACGP22612 351 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 RRM2P31350 389 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 GRK6P43250 576 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 KCNAB2Q13303 367 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 TRA2AQ13595 282 aaKnown RBP eCLIP18.74■□□□□ 0.59
PNKP-214ENST00000600573 MAPK11Q15759 364 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 LIN52Q52LA3 116 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 ZC3H14Q6PJT7 736 aaKnown RBP18.74■□□□□ 0.59
PNKP-214ENST00000600573 ZNF574Q6ZN55 896 aaPredicted RBP18.74■□□□□ 0.59
PNKP-214ENST00000600573 TTLL10Q6ZVT0 673 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 C8orf59Q8N0T1 100 aaPredicted RBP18.74■□□□□ 0.59
PNKP-214ENST00000600573 OR5D16Q8NGK9 328 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 STACQ99469 402 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 MAT2BQ9NZL9 334 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 TTC36A6NLP5 189 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 GP1BAP07359 652 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 TNFRSF1BP20333 461 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 TPD52P55327 224 aaPredicted RBP18.74■□□□□ 0.59
PNKP-214ENST00000600573 SPIBQ01892 262 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 IL18R1Q13478 541 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 DSG2Q14126 1118 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 ANKRD34AQ69YU3 496 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 KDM4DQ6B0I6 523 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 HEPHL1Q6MZM0 1159 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 TSEN54Q7Z6J9 526 aaKnown RBP18.74■□□□□ 0.59
PNKP-214ENST00000600573 SMYD1Q8NB12 490 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 PROX1Q92786 737 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 FKBP10Q96AY3 582 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 C16orf58Q96GQ5 468 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 BARD1Q99728 777 aaKnown RBP18.74■□□□□ 0.59
PNKP-214ENST00000600573 ARRDC1-AS1Q9H2J1 176 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 PIGUQ9H490 435 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 DUSP22Q9NRW4 184 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 NDUFA13Q9P0J0 144 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 ENPP4Q9Y6X5 453 aa18.74■□□□□ 0.59
PNKP-214ENST00000600573 BDP1A6H8Y1 2624 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 A0A1B0GX78 115 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 TNFRSF11BO00300 401 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 GALR2O43603 387 aaPredicted RBP18.73■□□□□ 0.59
PNKP-214ENST00000600573 SEC24DO94855 1032 aaPredicted RBP18.73■□□□□ 0.59
PNKP-214ENST00000600573 IFNW1P05000 195 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms