RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 VSTM2LQ96N03 204 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 LRRC37BQ96QE4 947 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 GAL3ST4Q96RP7 486 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC25A23Q9BV35 468 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 WWTR1Q9GZV5 400 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 CDCP1Q9H5V8 836 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 EPS8L2Q9H6S3 715 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 ZNF552Q9H707 407 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 EQTNQ9NQ60 294 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 MAP10Q9P2G4 905 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 PRODH2Q9UF12 536 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 VPS4AQ9UN37 437 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 ZZEF1O43149 2961 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 DMXL2Q8TDJ6 3036 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 ANGPT2O15123 496 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 ZNF354AO60765 605 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 COX4I1P13073 169 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 UQCRC2P22695 453 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 SOX11P35716 441 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 TRPC1P48995 793 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 ST13P50502 369 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 AP2B1P63010 937 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 PRR5P85299 388 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 ZNF155Q12901 538 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 CYLC2Q14093 348 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 LINC00303Q3SY05 128 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 REP15Q6BDI9 236 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC29A4Q7RTT9 530 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 RPS19BP1Q86WX3 136 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 MSRB3Q8IXL7 192 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 FITM2Q8N6M3 262 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 RP9Q8TA86 221 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 C16orf58Q96GQ5 468 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 MS4A4EQ96PG1 132 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 PHF12Q96QT6 1004 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC35A5Q9BS91 424 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 SERHL2Q9H4I8 314 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 GPATCH2Q9NW75 528 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC25A37Q9NYZ2 338 aa18.54■□□□□ 0.56
SHKBP1-222ENST00000600320 A0A096LPI6 279 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 C2orf92A0A1B0GVN3 265 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 WWP2O00308 870 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 ZCCHC18P0CG32 403 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 MLF1P58340 268 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 TP53BP2Q13625 1128 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 LASP1Q14847 261 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 NNATQ16517 81 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 EXOSC6Q5RKV6 272 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 LRIF1Q5T3J3 769 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 SAXO2Q658L1 398 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 FAM91A1Q658Y4 838 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 MFSD12Q6NUT3 480 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 DLEU7Q6UYE1 221 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 NPSR1Q6W5P4 371 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 C6orf120Q7Z4R8 191 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 ARMC10Q8N2F6 343 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 DPP10Q8N608 796 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC5A8Q8N695 610 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 OR56A1Q8NGH5 318 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 OR5L2Q8NGL0 311 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 FBXO30Q8TB52 745 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 ZFP90Q8TF47 636 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 MOAP1Q96BY2 351 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 OTUB1Q96FW1 271 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 AURKBQ96GD4 344 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 YIPF4Q9BSR8 244 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 NXF5Q9H1B4 397 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 ARL8BQ9NVJ2 186 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 MYOTQ9UBF9 498 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 CFL2Q9Y281 166 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 PCDHB14Q9Y5E9 798 aa18.53■□□□□ 0.56
SHKBP1-222ENST00000600320 TRBV5-3A0A0A0MS03 114 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 NADKO95544 446 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 ANP32DO95626 131 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 ITGB2P05107 769 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 HMGN2P05204 90 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 ACP2P11117 423 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 NR0B1P51843 470 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 CASP9P55211 416 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 POLE2P56282 527 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 CORO7P57737 925 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 RPS26P62854 115 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 PSG6Q00889 435 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 CRB2Q5IJ48 1285 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 IRAK1BP1Q5VVH5 260 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 TTC9Q92623 222 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 HOXB13Q92826 284 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 RCN3Q96D15 328 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 LMF2Q9BU23 707 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 ZBTB20Q9HC78 741 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 VAPAQ9P0L0 249 aa18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 GPR55Q9Y2T6 319 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-222ENST00000600320 ANKRD11Q6UB99 2663 aaPredicted RBP18.52■□□□□ 0.55
SHKBP1-222ENST00000600320 CHD6Q8TD26 2715 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 BBIP1A8MTZ0 92 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 MRASO14807 208 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 ERN1O75460 977 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 KCNH1O95259 989 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 CT45A8P0DMV1 189 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 CT45A9P0DMV2 189 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms