RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 MED12LQ86YW9 2145 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 FAM159BA6NKW6 160 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 UBXN8O00124 270 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 FOXE1O00358 373 aaPredicted RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 CASKO14936 926 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 SMAD7O15105 426 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 TO15178 435 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 KLF4O43474 513 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 KERAO60938 352 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CDH16O75309 829 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 UGT2B11O75310 529 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CRLF1O75462 422 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CNOT4O95628 575 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 CBX7O95931 251 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GBAP04062 536 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CRHP06850 196 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 THBDP07204 575 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 RHOXF2BP0C7M4 288 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 NR2F6P10588 404 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 EPB42P16452 691 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 STMN1P16949 149 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 ZNF708P17019 499 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 DRD5P21918 477 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CHMP24386 653 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CD79BP40259 229 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 BUD31P41223 144 aaPredicted RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 PPICP45877 212 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 MASP1P48740 699 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 TMED10P49755 219 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 EMDP50402 254 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 XKP51811 444 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 NEK2P51955 445 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GAS1P54826 345 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 SLC12A2P55011 1212 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GPX6P59796 221 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 RAB10P61026 200 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 EEF1A1P68104 462 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 SRYQ05066 204 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 ILF2Q12905 390 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 SNTA1Q13424 505 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GAB1Q13480 694 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 DDX39BQ13838 428 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 SETDB1Q15047 1291 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 TOMM20Q15388 145 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GUSBP1Q15486 140 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 BCL2A1Q16548 175 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 PRICKLE4Q2TBC4 344 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 EEF1A1P5Q5VTE0 462 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 VWA1Q6PCB0 445 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 CREG2Q8IUH2 290 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GALNT12Q8IXK2 581 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GCNT2Q8N0V5 402 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 TEX9Q8N6V9 391 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 OR4K14Q8NGD5 310 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 NXNL1Q96CM4 212 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 TSPAN17Q96FV3 270 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 ZNF681Q96N22 645 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 GPR78Q96P69 363 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 ZNF701Q9NV72 531 aaPredicted RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 KLHL28Q9NXS3 571 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 NUDT4Q9NZJ9 180 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 MAT2BQ9NZL9 334 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 OPTCQ9UBM4 332 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 HEY2Q9UBP5 337 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 FBXL2Q9UKC9 423 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 PACSIN3Q9UKS6 424 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 RNF112Q9ULX5 631 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 EIF3LQ9Y262 564 aaKnown RBP5.53□□□□□ -1.52
VRK3-220ENST00000600259 DLGAP4Q9Y2H0 992 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 RNF11Q9Y3C5 154 aa5.53□□□□□ -1.52
VRK3-220ENST00000600259 PRR14LQ5THK1 2151 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 GOLGA6L10A0A0M3HER8 536 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 TCRBV9S1A1TA0A576 114 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 HMX2A2RU54 273 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 FRG2CA6NGY1 282 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 C17orf51A8MQB3 221 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 ACOX3O15254 700 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 TSPAN2O60636 221 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 UGDHO60701 494 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 SEMA3DO95025 777 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 ATP1B1P05026 303 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 CT45A8P0DMV1 189 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 CT45A9P0DMV2 189 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 CPMP14384 443 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 PORP16435 677 aaPredicted RBP5.52□□□□□ -1.53
VRK3-220ENST00000600259 FPR1P21462 350 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 CNTFP26441 200 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 PIK3R1P27986 724 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 SRD5A2P31213 254 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 UGT2B10P36537 528 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 GP5P40197 560 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 CPA2P48052 419 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 PIK3CGP48736 1102 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 PTH2RP49190 550 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 RAP1GDS1P52306 607 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 DIO3P55073 304 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 NRG3P56975 720 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 RPP38P78345 283 aaKnown RBP5.52□□□□□ -1.53
VRK3-220ENST00000600259 HMGCS1Q01581 520 aa5.52□□□□□ -1.53
VRK3-220ENST00000600259 EXOSC7Q15024 291 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms