RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 LIX1Q8N485 282 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 OR7G2Q8NG99 324 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 PAQR8Q8TEZ7 354 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 MAGED4Q96JG8 741 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 AMDHD1Q96NU7 426 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 SORT1Q99523 831 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 GLIPR2Q9H4G4 154 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 CNIH4Q9P003 139 aa25.96■■□□□ 1.75
SSBP4-206ENST00000599699 POLEQ07864 2286 aa25.95■■□□□ 1.75
SSBP4-206ENST00000599699 USP9XQ93008 2570 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-206ENST00000599699 FAM166BA8MTA8 275 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 LRRTM2O43300 516 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 CDC40O60508 579 aaKnown RBP eCLIP25.95■■□□□ 1.74
SSBP4-206ENST00000599699 PLOD3O60568 738 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 HPCAL1P37235 193 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 MC3RP41968 323 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 SLC18A1P54219 525 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 KCNJ2P63252 427 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 RPS6KA2Q15349 733 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 AGBL2Q5U5Z8 902 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 C1QL3Q5VWW1 255 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 TMEM107Q6UX40 140 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 GHDCQ8N2G8 530 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 SSC4DQ8WTU2 575 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 HSPBAP1Q96EW2 488 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 SH2D2AQ9NP31 389 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 TAS2R9Q9NYW1 312 aa25.95■■□□□ 1.74
SSBP4-206ENST00000599699 ERRFI1Q9UJM3 462 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-206ENST00000599699 CHCHD2Q9Y6H1 151 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-206ENST00000599699 ZGRF1Q86YA3 2104 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 TRGV8A0A0C4DH27 118 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 SLITRK5O94991 958 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 STSP08842 583 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 ABCD3P28288 659 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 PPICP45877 212 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 C4orf17Q53FE4 359 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 IL23RQ5VWK5 629 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 HDXQ7Z353 690 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 R3HCC1LQ7Z5L2 792 aaKnown RBP25.94■■□□□ 1.74
SSBP4-206ENST00000599699 SLC22A16Q86VW1 577 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 FBXW8Q8N3Y1 598 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 DIO2Q92813 273 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 CIDECQ96AQ7 238 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-206ENST00000599699 ARL8AQ96BM9 186 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 TTTY12Q9BZ98 90 aa25.94■■□□□ 1.74
SSBP4-206ENST00000599699 EIF3LQ9Y262 564 aaKnown RBP25.94■■□□□ 1.74
SSBP4-206ENST00000599699 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.94■■□□□ 1.74
SSBP4-206ENST00000599699 ACOX3O15254 700 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 COQ9O75208 318 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 NME6O75414 186 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 DDX5P17844 614 aaKnown RBP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 DRD5P21918 477 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 GPC1P35052 558 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 CASP6P55212 293 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 RPP38P78345 283 aaKnown RBP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 HSF1Q00613 529 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 PLCXD2Q0VAA5 305 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 HSPB3Q12988 150 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 ZFP28Q8NHY6 868 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 ZNF764Q96H86 408 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 DEFB127Q9H1M4 99 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 IL1RL2Q9HB29 575 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 FOLH1BQ9HBA9 442 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 DDX18Q9NVP1 670 aaKnown RBP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 TUBA8Q9NY65 449 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-206ENST00000599699 SH3BGRL2Q9UJC5 107 aa25.93■■□□□ 1.74
SSBP4-206ENST00000599699 HIVEP3Q5T1R4 2406 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 FRG2CA6NGY1 282 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 SLC19A2O60779 497 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 TBX19O60806 448 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 PPM1BO75688 479 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 PRPS2P11908 318 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 ZNF155Q12901 538 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 MAD2L1Q13257 205 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 PDE7AQ13946 482 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 ZNF385BQ569K4 471 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 ATG16L1Q676U5 607 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 BNC2Q6ZN30 1099 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 RGS9BPQ6ZS82 235 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 ZNF551Q7Z340 670 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 FJX1Q86VR8 437 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 GOLGA6L1Q8N7Z2 621 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 OR52N2Q8NGI0 321 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 MTERF3Q96E29 417 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 OMA1Q96E52 524 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 ZBED6CLQ96FA7 236 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 JSRP1Q96MG2 331 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 DOHHQ9BU89 302 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 PNPOQ9NVS9 261 aa25.92■■□□□ 1.74
SSBP4-206ENST00000599699 GPR55Q9Y2T6 319 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-206ENST00000599699 COL12A1Q99715 3063 aa25.91■■□□□ 1.74
SSBP4-206ENST00000599699 A0A087WV62 115 aa25.91■■□□□ 1.74
SSBP4-206ENST00000599699 A0A1B0GUH1 482 aa25.91■■□□□ 1.74
SSBP4-206ENST00000599699 ERN1O75460 977 aaKnown RBP25.91■■□□□ 1.74
SSBP4-206ENST00000599699 PDE9AO76083 593 aa25.91■■□□□ 1.74
SSBP4-206ENST00000599699 ABOP16442 354 aa25.91■■□□□ 1.74
SSBP4-206ENST00000599699 RPL3P39023 403 aaKnown RBP25.91■■□□□ 1.74
SSBP4-206ENST00000599699 MANFP55145 182 aaKnown RBP25.91■■□□□ 1.74
SSBP4-206ENST00000599699 PTGR1Q14914 329 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms