RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TMED10P49755 219 aaKnown RBP15.4■□□□□ 0.06
SSBP4-204ENST00000597724 RPL14P50914 215 aaKnown RBP15.4■□□□□ 0.06
SSBP4-204ENST00000597724 DCAF7P61962 342 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 PDE7AQ13946 482 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 AGBL2Q5U5Z8 902 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 ANKRD26P1Q6NSI1 321 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 BNC2Q6ZN30 1099 aaPredicted RBP15.4■□□□□ 0.06
SSBP4-204ENST00000597724 GK5Q6ZS86 529 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 FAM47EQ6ZV65 393 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 MGARPQ8TDB4 240 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 ARL8AQ96BM9 186 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 TUBGCP3Q96CW5 907 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 MTERF3Q96E29 417 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 HSPBAP1Q96EW2 488 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 LCORQ96JN0 433 aaPredicted RBP15.4■□□□□ 0.06
SSBP4-204ENST00000597724 AMDHD1Q96NU7 426 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 PROK2Q9HC23 129 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 GPR55Q9Y2T6 319 aaPredicted RBP15.4■□□□□ 0.06
SSBP4-204ENST00000597724 A0A087WV62 115 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 PLOD2O00469 737 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 TP53I11O14683 189 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 TFECO14948 347 aaPredicted RBP15.39■□□□□ 0.05
SSBP4-204ENST00000597724 LRRTM2O43300 516 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 HS6ST1O60243 411 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 H2AFXP16104 143 aaPredicted RBP15.39■□□□□ 0.05
SSBP4-204ENST00000597724 NAGAP17050 411 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 PIGAP37287 484 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 DNASE1L1P49184 302 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 FBXW4P57775 412 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 RBPJQ06330 500 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 FOXO1Q12778 655 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 RPS6KA2Q15349 733 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 PDCD2Q16342 344 aaPredicted RBP15.39■□□□□ 0.05
SSBP4-204ENST00000597724 NNATQ16517 81 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 C4orf17Q53FE4 359 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 ZNF385BQ569K4 471 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 KIRREL3Q8IZU9 778 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 GHDCQ8N2G8 530 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 FBXW8Q8N3Y1 598 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 LIX1Q8N485 282 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 FNDC5Q8NAU1 212 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 OR5M3Q8NGP4 307 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 PPCDCQ96CD2 204 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 VSTM2LQ96N03 204 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 TTTY12Q9BZ98 90 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 NKIRAS1Q9NYS0 192 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 TAS2R9Q9NYW1 312 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 SH3BP4Q9P0V3 963 aa15.39■□□□□ 0.05
SSBP4-204ENST00000597724 CNOT11Q9UKZ1 510 aaKnown RBP15.39■□□□□ 0.05
SSBP4-204ENST00000597724 SPTAN1Q13813 2472 aaKnown RBP15.39■□□□□ 0.05
SSBP4-204ENST00000597724 ANKRD33BA6NCL7 494 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 WIPF3A6NGB9 483 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 FRG2CA6NGY1 282 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 TO15178 435 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ACOX3O15254 700 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PDPK1O15530 556 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 NME6O75414 186 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PPM1BO75688 479 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 GLSO94925 669 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PRPS2P11908 318 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 MC3RP41968 323 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 FRKP42685 505 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PPIAP62937 165 aaKnown RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PLGLB1Q02325 96 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 SMU1Q2TAY7 513 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 CMPK2Q5EBM0 449 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PRAMEF20Q5VT98 475 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 IL23RQ5VWK5 629 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 TMEM107Q6UX40 140 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 RGS9BPQ6ZS82 235 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ZNF551Q7Z340 670 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 CHERPQ8IWX8 916 aaKnown RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 PRR22Q8IZ63 422 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 SSC4DQ8WTU2 575 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 RELTQ969Z4 430 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 CIDECQ96AQ7 238 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ELP4Q96EB1 424 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 BTBD9Q96Q07 612 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 SECISBP2Q96T21 854 aaKnown RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 C1orf50Q9BV19 199 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 IL1RL2Q9HB29 575 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 FOLH1BQ9HBA9 442 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ARGLU1Q9NWB6 273 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 TUBA8Q9NY65 449 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ATP6V1HQ9UI12 483 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 C19orf53Q9UNZ5 99 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 ZNF835Q9Y2P0 537 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.38■□□□□ 0.05
SSBP4-204ENST00000597724 DOPEY1Q5JWR5 2465 aa15.38■□□□□ 0.05
SSBP4-204ENST00000597724 GTF3C1Q12789 2109 aa15.37■□□□□ 0.05
SSBP4-204ENST00000597724 UPK1AO00322 258 aa15.37■□□□□ 0.05
SSBP4-204ENST00000597724 SLC19A2O60779 497 aa15.37■□□□□ 0.05
SSBP4-204ENST00000597724 SNNO75324 88 aaPredicted RBP15.37■□□□□ 0.05
SSBP4-204ENST00000597724 ERN1O75460 977 aaKnown RBP15.37■□□□□ 0.05
SSBP4-204ENST00000597724 LDLRP01130 860 aa15.37■□□□□ 0.05
SSBP4-204ENST00000597724 ABCB1P08183 1280 aaPredicted RBP15.37■□□□□ 0.05
SSBP4-204ENST00000597724 IFI6P09912 130 aa15.37■□□□□ 0.05
SSBP4-204ENST00000597724 CT45A8P0DMV1 189 aa15.37■□□□□ 0.05
SSBP4-204ENST00000597724 CT45A9P0DMV2 189 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms