RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 CHRNB4P30926 498 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 CASP3P42574 277 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 TRPC1P48995 793 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 NAGLUP54802 743 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 NRG3P56975 720 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 DNAJB13P59910 316 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 VSNL1P62760 191 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 SLC18A2Q05940 514 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 BTKQ06187 659 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 ZNF763Q0D2J5 394 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 PMPCAQ10713 525 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 SLC10A1Q14973 349 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 CCDC153Q494R4 210 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 CCDC116Q8IYX3 515 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 CNPY4Q8N129 248 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 NEIL3Q8TAT5 605 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 RDH11Q8TC12 318 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 RND1Q92730 232 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 OMA1Q96E52 524 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 LCORQ96JN0 433 aaPredicted RBP11.95□□□□□ -0.5
LIG1-212ENST00000596549 NODALQ96S42 347 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 TTYH2Q9BSA4 534 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 SHCBP1LQ9BZQ2 653 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 UCK2Q9BZX2 261 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 LDAHQ9H6V9 325 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 PPCSQ9HAB8 311 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 ACKR4Q9NPB9 350 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 OXSMQ9NWU1 459 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 EHD3Q9NZN3 535 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 EXO1Q9UQ84 846 aaKnown RBP11.95□□□□□ -0.5
LIG1-212ENST00000596549 C15orf41Q9Y2V0 281 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
LIG1-212ENST00000596549 PTGDR2Q9Y5Y4 395 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 PKDREJQ9NTG1 2253 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 ABCA12Q86UK0 2595 aa11.95□□□□□ -0.5
LIG1-212ENST00000596549 CAPN14A8MX76 684 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 COPEO14579 308 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 WDR1O75083 606 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 CDH16O75309 829 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 UGT2B11O75310 529 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 GLI4P10075 376 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 KRT4P19013 534 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 ADH7P40394 386 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 CORO7P57737 925 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 CRYZQ08257 329 aaKnown RBP11.94□□□□□ -0.5
LIG1-212ENST00000596549 PLCXD2Q0VAA5 305 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 C1orf185Q5T7R7 199 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 WLSQ5T9L3 541 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 LIPMQ5VYY2 423 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 CLEC6AQ6EIG7 209 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 TMEM81Q6P7N7 255 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 NPSR1Q6W5P4 371 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 B3GNT6Q6ZMB0 384 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 SEM1Q6ZVN7 128 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 TRIM46Q7Z4K8 759 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.94□□□□□ -0.5
LIG1-212ENST00000596549 ASB5Q8WWX0 329 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 KAT2AQ92830 837 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 SARAFQ96BY9 339 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 TMEM41AQ96HV5 264 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 VSTM2LQ96N03 204 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 EXO5Q9H790 373 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 GALNT9Q9HCQ5 603 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 MKS1Q9NXB0 559 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 B4GALT7Q9UBV7 327 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 PSME2Q9UL46 239 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 GRID1Q9ULK0 1009 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 CFL2Q9Y281 166 aa11.94□□□□□ -0.5
LIG1-212ENST00000596549 DOCK7Q96N67 2140 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 A0A0G2JNJ9 132 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 CCDC151A5D8V7 595 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 FRG2CA6NGY1 282 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 B4DXG7 233 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 GNB5O14775 395 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 TO15178 435 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 ACOX3O15254 700 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 RSL1D1O76021 490 aaKnown RBP11.93□□□□□ -0.5
LIG1-212ENST00000596549 TOXO94900 526 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 HPNP05981 417 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 ANXA4P09525 319 aaPredicted RBP11.93□□□□□ -0.5
LIG1-212ENST00000596549 NUDT17P0C025 328 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 CT45A8P0DMV1 189 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 CT45A9P0DMV2 189 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 CPA3P15088 417 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 NAGAP17050 411 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 DDCP20711 480 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 MSX1P28360 303 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 PTPN6P29350 595 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 PPICP45877 212 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 GSTM5P46439 218 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 MASP1P48740 699 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 CDK9P50750 372 aaKnown RBP11.93□□□□□ -0.5
LIG1-212ENST00000596549 HEPACAMQ14CZ8 416 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 IMPG1Q17R60 797 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 CT45A2Q5DJT8 189 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 DCST1Q5T197 706 aa11.93□□□□□ -0.5
LIG1-212ENST00000596549 TMEM198Q66K66 360 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms