RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MPIP34949 423 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 MAGEA5P43359 124 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 FBXW4P57775 412 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 MRPS35P82673 323 aaKnown RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 ZNF844Q08AG5 666 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 C2orf80Q0P641 193 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 ARL13AQ5H913 290 aaPredicted RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 XKRXQ6PP77 449 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 TMEM64Q6YI46 380 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 MRGPRGQ86SM5 289 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 CLYBLQ8N0X4 340 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 FAM13CQ8NE31 585 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 OR52R1Q8NGF1 315 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 OR2T11Q8NH01 316 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 SPPL2AQ8TCT8 520 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 EXOSC8Q96B26 276 aaKnown RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 LCORQ96JN0 433 aaPredicted RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 MECRQ9BV79 373 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 ITPAQ9BY32 194 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 ANGPTL4Q9BY76 406 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 STMN4Q9H169 189 aaPredicted RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 SSU72Q9NP77 194 aaKnown RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 C1orf109Q9NX04 203 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 BCAP29Q9UHQ4 241 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 SH3BGRL2Q9UJC5 107 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 BOKQ9UMX3 212 aaPredicted RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 GPR55Q9Y2T6 319 aaPredicted RBP11.99□□□□□ -0.49
USE1-207ENST00000596136 TRAF6Q9Y4K3 522 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 NCKAP5O14513 1909 aa11.99□□□□□ -0.49
USE1-207ENST00000596136 CACNA1CQ13936 2221 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 PHF3Q92576 2039 aaKnown RBP11.98□□□□□ -0.49
USE1-207ENST00000596136 A0A087WV62 115 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 PLOD2O00469 737 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 CDC40O60508 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
USE1-207ENST00000596136 TBX19O60806 448 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 SEC22BO75396 215 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 PPM1BO75688 479 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 PDE9AO76083 593 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 SLITRK5O94991 958 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 SNX4O95219 450 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 BPGMP07738 259 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 IFI6P09912 130 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 RFPL3SP0C7P2 107 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 ESRRAP11474 423 aaPredicted RBP11.98□□□□□ -0.49
USE1-207ENST00000596136 TACR1P25103 407 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 COL8A1P27658 744 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 ARRB2P32121 409 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 KCNJ2P63252 427 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 SLC10A1Q14973 349 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 KRT71Q3SY84 523 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 EMC4Q5J8M3 183 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 PRAMEF20Q5VT98 475 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 TRILQ7L0X0 811 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 NUP54Q7Z3B4 507 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 TICAM1Q8IUC6 712 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 SLC34A3Q8N130 599 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 EID3Q8N140 333 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 OR9A2Q8NGT5 310 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 HGDQ93099 445 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 EGLN2Q96KS0 407 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 VSTM2LQ96N03 204 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 BTBD9Q96Q07 612 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 ZNF703Q9H7S9 590 aaPredicted RBP11.98□□□□□ -0.49
USE1-207ENST00000596136 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
USE1-207ENST00000596136 ACKR4Q9NPB9 350 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 ENTPD4Q9Y227 616 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 TMED5Q9Y3A6 229 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 POLR3HQ9Y535 204 aaPredicted RBP11.98□□□□□ -0.49
USE1-207ENST00000596136 PTGDR2Q9Y5Y4 395 aa11.98□□□□□ -0.49
USE1-207ENST00000596136 ADGRG4Q8IZF6 3080 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 FRG2CA6NGY1 282 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 AQP7O14520 342 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 LSM1O15116 133 aaKnown RBP11.97□□□□□ -0.49
USE1-207ENST00000596136 HCN1O60741 890 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CHEK2O96017 543 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 TPOP07202 933 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CELA3AP09093 270 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CT45A8P0DMV1 189 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CT45A9P0DMV2 189 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 DCTP40126 519 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CASP3P42574 277 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 SMSP52788 366 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 PSPHP78330 225 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 RPP38P78345 283 aaKnown RBP11.97□□□□□ -0.49
USE1-207ENST00000596136 RFTN2Q52LD8 501 aaPredicted RBP11.97□□□□□ -0.49
USE1-207ENST00000596136 CT45A2Q5DJT8 189 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 FNDC7Q5VTL7 733 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 EXOC3L1Q86VI1 746 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 FAM9CQ8IZT9 166 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 OR7G2Q8NG99 324 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 OR5M3Q8NGP4 307 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 DIO2Q92813 273 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 KAT2AQ92830 837 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 BBS4Q96RK4 519 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 CCT7Q99832 543 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 DOHHQ9BU89 302 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms