RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OMA1Q96E52 524 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 Q96MF0 132 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 OSBPL11Q9BXB4 747 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 ITPAQ9BY32 194 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 SAYSD1Q9NPB0 183 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 C6orf203Q9P0P8 240 aaPredicted RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 NDRG3Q9UGV2 375 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 ZNF639Q9UID6 485 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 PACSIN3Q9UKS6 424 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 MAPRE3Q9UPY8 281 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 EIF3LQ9Y262 564 aaKnown RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 RNF11Q9Y3C5 154 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 ANGPTL3Q9Y5C1 460 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PRAMEF25A6NGN4 478 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 MSTNO14793 375 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 EIF3HO15372 352 aaKnown RBP eCLIP9.04□□□□□ -0.96
LIG1-209ENST00000596104 CBR3O75828 277 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 TGM6O95932 706 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PORP16435 677 aaPredicted RBP9.04□□□□□ -0.96
LIG1-209ENST00000596104 CHMP24386 653 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CNTFP26441 200 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PCSK6P29122 969 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CRABP2P29373 138 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CCKARP32238 428 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 GCKP35557 465 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PIK3CGP48736 1102 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 STARP49675 285 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 DIO3P55073 304 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CLDN18P56856 261 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 EEF1A1P68104 462 aaKnown RBP9.04□□□□□ -0.96
LIG1-209ENST00000596104 FAM27E3Q08E93 113 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 MAP4K2Q12851 820 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 GAB1Q13480 694 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 SLMAPQ14BN4 828 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 ACKR1Q16570 336 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PFKFB4Q16877 469 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PRICKLE4Q2TBC4 344 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 KBTBD12Q3ZCT8 623 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 GRTP1Q5TC63 336 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 EEF1A1P5Q5VTE0 462 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 FAM111BQ6SJ93 734 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 C3orf62Q6ZUJ4 267 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 RAPH1Q70E73 1250 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 GOLGA7Q7Z5G4 137 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CTAGE3PQ8IX95 158 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 SIMC1Q8NDZ2 872 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 OR14L1PQ8NHC6 308 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 PPP1R14CQ8TAE6 165 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 RHEBL1Q8TAI7 183 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 RDH11Q8TC12 318 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 KCTD4Q8WVF5 259 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 LCORQ96JN0 433 aaPredicted RBP9.04□□□□□ -0.96
LIG1-209ENST00000596104 MARK4Q96L34 752 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 WFIKKN1Q96NZ8 548 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 SERPINI1Q99574 410 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 BDH2Q9BUT1 245 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 MAT2BQ9NZL9 334 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CES1P1Q9UKY3 287 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 MED12Q93074 2177 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 HIVEP2P31629 2446 aa9.04□□□□□ -0.96
LIG1-209ENST00000596104 CCDC189A1A4V9 331 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 TRIM64A6NGJ6 449 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 TRIM64BA6NI03 449 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 SYCE1LA8MT33 242 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 B4DXG7 233 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 CCDC188H7C350 402 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 TO15178 435 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ACOX3O15254 700 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 SIX3O95343 332 aaPredicted RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 CBX7O95931 251 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ATP1B1P05026 303 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 KLK1P06870 262 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 GSTA2P09210 222 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 GFAPP14136 432 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ZNF708P17019 499 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 CRYGSP22914 178 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 LOXP28300 417 aaPredicted RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 SRD5A2P31213 254 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 CPOXP36551 454 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 MC3RP41968 323 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ALDH18A1P54886 795 aaKnown RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 MRPS25P82663 173 aaKnown RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 IRF9Q00978 393 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 HMGCS1Q01581 520 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 DUSP2Q05923 314 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 PLCXD2Q0VAA5 305 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 GTF2H2Q13888 395 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 EXOSC7Q15024 291 aaKnown RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 C6orf163Q5TEZ5 329 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 SLC48A1Q6P1K1 146 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 GTF2H2CQ6P1K8 395 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ZNF474Q6S9Z5 364 aaPredicted RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 SCIMPQ6UWF3 145 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 YTHDF3Q7Z739 585 aaKnown RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 IFNEQ86WN2 208 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 PLCZ1Q86YW0 608 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 GRAMD2AQ8IUY3 354 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 PPM1NQ8N819 430 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms