RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FGF4P08620 206 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 PIK3R1P27986 724 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 PIGAP37287 484 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 PEX19P40855 299 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 ETV4P43268 484 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 GSTM5P46439 218 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 IST1P53990 364 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 FOXA1P55317 472 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 ARSKQ6UWY0 536 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 TRIM46Q7Z4K8 759 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 ST13P4Q8IZP2 240 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 OR4K14Q8NGD5 310 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 SPACA9Q96E40 222 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 METTL2AQ96IZ6 378 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 FOXC2Q99958 501 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 MECRQ9BV79 373 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 SHCBP1LQ9BZQ2 653 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 ZFP64Q9NPA5 681 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 ACKR4Q9NPB9 350 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 SIRT5Q9NXA8 310 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 QPCTLQ9NXS2 382 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 SPRR3Q9UBC9 169 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 B4GALT7Q9UBV7 327 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 BOKQ9UMX3 212 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 GNG14A0A1W2PPG7 69 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 GLOD5A6NK44 160 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 RGS14O43566 566 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 SLC35E2P0CK97 266 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 CHN1P15882 459 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 SERPINB3P29508 390 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 GALNSP34059 522 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 SERPINB4P48594 390 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 HMGCS1Q01581 520 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 BTKQ06187 659 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 ARL13AQ5H913 290 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 GALNT18Q6P9A2 607 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 SCIMPQ6UWF3 145 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 LRRC25Q8N386 305 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 FBXW8Q8N3Y1 598 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 FAM76AQ8TAV0 307 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 NRGNQ92686 78 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 TM4SF18Q96CE8 201 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 FBXL20Q96IG2 436 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 CNPPD1Q9BV87 410 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 TMUB1Q9BVT8 246 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 EXO5Q9H790 373 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 TEX10Q9NXF1 929 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 DNAJB12Q9NXW2 375 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 TRAF6Q9Y4K3 522 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 PCDHA9Q9Y5H5 950 aa16.12■□□□□ 0.17
SHKBP1-203ENST00000594298 ZFHX3Q15911 3703 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 PGRMC2O15173 223 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 PCDH7O60245 1069 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 RSL1D1O76021 490 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 SNUPNO95149 360 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 FBXO45P0C2W1 286 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 NEFHP12036 1026 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 DRD2P14416 443 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 KCNJ2P63252 427 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 CASP8Q14790 479 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 C6orf163Q5TEZ5 329 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 DGAT2L6Q6ZPD8 337 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 RNF165Q6ZSG1 346 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 APIPQ96GX9 242 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 PROK2Q9HC23 129 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 CNIH4Q9P003 139 aa16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 CHCHD2Q9Y6H1 151 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-203ENST00000594298 ZNF407Q9C0G0 2248 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 LRRC3CA6NJW4 275 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 HRKO00198 91 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 SYT5O00445 386 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 PRKRAO75569 313 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 ANXA4P09525 319 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 RFPL3SP0C7P2 107 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 CD99P14209 185 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 TIA1P31483 386 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 XKP51811 444 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 HEPACAMQ14CZ8 416 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 SPRED3Q2MJR0 410 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 CLEC6AQ6EIG7 209 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 ZCCHC23Q6ZST2 131 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 WDR53Q7Z5U6 358 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 SAMD14Q8IZD0 417 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 CHDHQ8NE62 594 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 NEIL3Q8TAT5 605 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 RIT1Q92963 219 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 PPWD1Q96BP3 646 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 POM121Q96HA1 1249 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 FIS1Q9Y3D6 152 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 ZNF780BQ9Y6R6 833 aa16.1■□□□□ 0.17
SHKBP1-203ENST00000594298 INTS1Q8N201 2190 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 HSPB2A8KAH6 182 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 SEC22BO75396 215 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 SERPINE1P05121 402 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 PORP16435 677 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms