RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CAPN14A8MX76 684 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 LSM1O15116 133 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 PLOD3O60568 738 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 NME6O75414 186 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 IGHG3P01860 377 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 ABCB1P08183 1280 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 CELA3AP09093 270 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 RFPL3SP0C7P2 107 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 MPIP34949 423 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 PPICP45877 212 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 NRG3P56975 720 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 NNATQ16517 81 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 RFTN2Q52LD8 501 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 BICRALQ6AI39 1079 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 MTFR2Q6P444 385 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 ARHGAP11AQ6P4F7 1023 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 C3P1Q6ZMU1 363 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 FAM109AQ8N4B1 249 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 FAM57AQ8TBR7 257 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 SPPL2AQ8TCT8 520 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 ZBTB9Q96C00 473 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 LCORQ96JN0 433 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 EML4Q9HC35 981 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 ZFP64Q9NPA5 681 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 GIMAP4Q9NUV9 329 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 PRODH2Q9UF12 536 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 LIPGQ9Y5X9 500 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 A0A1B0GVC2 190 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 PRRG2O14669 202 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 TP53I11O14683 189 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 CTIFO43310 598 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 TRIM3O75382 744 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 BCAS2O75934 225 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 CHEK2O96017 543 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 NEFHP12036 1026 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 NAGAP17050 411 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 DRD5P21918 477 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 SERPINB5P36952 375 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 KCNJ2P63252 427 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 EMC4Q5J8M3 183 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 SH2D4BQ5SQS7 431 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 CEP85LQ5SZL2 805 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 DESI1Q6ICB0 168 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 NCCRP1Q6ZVX7 275 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 IKBIPQ70UQ0 350 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 OR7G2Q8NG99 324 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 TWIST2Q8WVJ9 160 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 DIO2Q92813 273 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 HSPBAP1Q96EW2 488 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 BBS4Q96RK4 519 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 DMRTA2Q96SC8 542 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 SECISBP2Q96T21 854 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 SSU72Q9NP77 194 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 MIEF1Q9NQG6 463 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 ZDHHC2Q9UIJ5 367 aa16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 GPR55Q9Y2T6 319 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-202ENST00000593764 ATP6AP2A0A1C7CYW4 349 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 E9PLN8 166 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 PIP5K1BO14986 540 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 TO15178 435 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 ACOX3O15254 700 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 PPM1BO75688 479 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 ATP6AP2O75787 350 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 JUNP05412 331 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 CT45A8P0DMV1 189 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 CT45A9P0DMV2 189 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 ESRRAP11474 423 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 SDC1P18827 310 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 CASP3P42574 277 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 SERPINB4P48594 390 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 TMED10P49755 219 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 DCAF7P61962 342 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 MPP2Q14168 576 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 SLC10A1Q14973 349 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 CT45A2Q5DJT8 189 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 FNDC7Q5VTL7 733 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 PAOXQ6QHF9 649 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 RPTNQ6XPR3 784 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 TRILQ7L0X0 811 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 MRGPRGQ86SM5 289 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 CD163Q86VB7 1156 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 HOMEZQ8IX15 550 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 FAM9CQ8IZT9 166 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 ZNF808Q8N4W9 903 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 AGR3Q8TD06 166 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 HGDQ93099 445 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 VSTM2LQ96N03 204 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 BTBD9Q96Q07 612 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 VKORC1Q9BQB6 163 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 DOHHQ9BU89 302 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 ANGPTL4Q9BY76 406 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 GLIPR2Q9H4G4 154 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 ZNF703Q9H7S9 590 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 BOKQ9UMX3 212 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 EXPH5Q8NEV8 1989 aa16.96■□□□□ 0.31
SHKBP1-202ENST00000593764 NCKAP5O14513 1909 aa16.96■□□□□ 0.3
SHKBP1-202ENST00000593764 FRG2CA6NGY1 282 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 TPOP07202 933 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 DHRS4L1P0CG22 281 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms