RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 BRINP2Q9C0B6 783 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 MAT2BQ9NZL9 334 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 BCAP29Q9UHQ4 241 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 SLC12A4Q9UP95 1085 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 NIPBLQ6KC79 2804 aaeCLIP21.81■■□□□ 1.08
LSM4-202ENST00000593564 TUBAL3A6NHL2 446 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 SNPHO15079 494 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 ACOX3O15254 700 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 IL18BPO95998 194 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 ACTL6AO96019 429 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 RPS17P08708 135 aaKnown RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 RHOXF2BP0C7M4 288 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 CSNK2A2P19784 350 aaPredicted RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 KLK2P20151 261 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 DEKP35659 375 aaKnown RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 FEN1P39748 380 aaKnown RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 PPP2R2AP63151 447 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 SORDQ00796 357 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 GALNT1Q10472 559 aaPredicted RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 SNTA1Q13424 505 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 C8orf74Q6P047 294 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 YRDCQ86U90 279 aaKnown RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 MMP21Q8N119 569 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 ZPLD1Q8TCW7 415 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 MBD6Q96DN6 1003 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 OMA1Q96E52 524 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 POM121Q96HA1 1249 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 LCORQ96JN0 433 aaPredicted RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 NODALQ96S42 347 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 OSBPL11Q9BXB4 747 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 EPB41L4BQ9H329 900 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 FARSBQ9NSD9 589 aaKnown RBP21.81■■□□□ 1.08
LSM4-202ENST00000593564 JKAMPQ9P055 326 aa21.81■■□□□ 1.08
LSM4-202ENST00000593564 ERAL1O75616 437 aaKnown RBP21.8■■□□□ 1.08
LSM4-202ENST00000593564 CBX7O95931 251 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 OTCP00480 354 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 INHBAP08476 426 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 EPXP11678 715 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 COL6A2P12110 1019 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 GCKP35557 465 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 SOX18P35713 384 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 PTGDSP41222 190 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 PLCXD2Q0VAA5 305 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 RCAN2Q14206 197 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 EXOSC7Q15024 291 aaKnown RBP21.8■■□□□ 1.08
LSM4-202ENST00000593564 DESI1Q6ICB0 168 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 PAMR1Q6UXH9 720 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 TAOK1Q7L7X3 1001 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 TM4SF18Q96CE8 201 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 CTHRC1Q96CG8 243 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 KLHL29Q96CT2 875 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 LRRC1Q9BTT6 524 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 BRF2Q9HAW0 419 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 PSME2Q9UL46 239 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 PLLPQ9Y342 182 aa21.8■■□□□ 1.08
LSM4-202ENST00000593564 MPDZO75970 2070 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 KIAA1549Q9HCM3 1950 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 A0A1B0GTL3 188 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 EEF1E1-BLOC1S5C9J1V9 151 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 EEF1E1O43324 174 aaKnown RBP21.79■■□□□ 1.08
LSM4-202ENST00000593564 ICOSLGO75144 302 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 PDYNP01213 254 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 CPN1P15169 458 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 SERPINB9P50453 376 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 DGKQP52824 942 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 DCAF7P61962 342 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 LETMD1Q6P1Q0 360 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 CAMKMTQ7Z624 323 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 C9orf106Q8NAJ2 232 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 ZNF483Q8TF39 744 aaPredicted RBP21.79■■□□□ 1.08
LSM4-202ENST00000593564 SELENOMQ8WWX9 145 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 MRPL57Q9BQC6 102 aaKnown RBP21.79■■□□□ 1.08
LSM4-202ENST00000593564 FAIM2Q9BWQ8 316 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 GALNT9Q9HCQ5 603 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 KLRF1Q9NZS2 232 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 PRODH2Q9UF12 536 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 SNX6Q9UNH7 406 aa21.79■■□□□ 1.08
LSM4-202ENST00000593564 EXO1Q9UQ84 846 aaKnown RBP21.79■■□□□ 1.08
LSM4-202ENST00000593564 MED12Q93074 2177 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 UGT2B11O75310 529 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 CYP4B1P13584 511 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 DRD5P21918 477 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 PPICP45877 212 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 AGFG1P52594 562 aaKnown RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 TRA2BP62995 288 aaKnown RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 DUSP2Q05923 314 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 CKAP4Q07065 602 aaKnown RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 RPS27LQ71UM5 84 aaKnown RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 C17orf53Q8N3J3 647 aaPredicted RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 SIMC1Q8NDZ2 872 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 ADCY4Q8NFM4 1077 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 OR52R1Q8NGF1 315 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 CNRIP1Q96F85 164 aaPredicted RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 PAFAH2Q99487 392 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 C1QTNF3Q9BXJ4 246 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 OR2B2Q9GZK3 357 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 MRPL46Q9H2W6 279 aaKnown RBP21.78■■□□□ 1.08
LSM4-202ENST00000593564 SERHLQ9NQF3 203 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 NMRK1Q9NWW6 199 aa21.78■■□□□ 1.08
LSM4-202ENST00000593564 DOCK7Q96N67 2140 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms