RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 STT3AP46977 705 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ERFP50548 548 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 BTG2P78543 158 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 MRPS22P82650 360 aaKnown RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 EEF1A2Q05639 463 aaKnown RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 MAP4K2Q12851 820 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 RCN1Q15293 331 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 LTB4RQ15722 352 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 FHL5Q5TD97 284 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 C1orf189Q5VU69 101 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 ZC3H7AQ8IWR0 971 aaKnown RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 EID3Q8N140 333 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 METTL25Q8N6Q8 603 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 HORMAD2Q8N7B1 307 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 SLC38A9Q8NBW4 561 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 NUP43Q8NFH3 380 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ADCY4Q8NFM4 1077 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 OR7G2Q8NG99 324 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 KAT2AQ92830 837 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 FAM162AQ96A26 154 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 CTHRC1Q96CG8 243 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 CLIP3Q96DZ5 547 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 RBM18Q96H35 190 aaKnown RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 LRFN5Q96NI6 719 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 RBCK1Q9BYM8 510 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 DPH1Q9BZG8 443 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 APMAPQ9HDC9 416 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 A4GALTQ9NPC4 353 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 CCM2LQ9NUG4 571 aaPredicted RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 DDX18Q9NVP1 670 aaKnown RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 MAT2BQ9NZL9 334 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ZNF451Q9Y4E5 1061 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 DHRS12A0PJE2 317 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 SYNDIG1LA6NDD5 238 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 H0Y3Z8 333 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 TGFBR3LH3BV60 316 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 CDC123O75794 336 aaPredicted RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 HMGN2P05204 90 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 CCL4P13236 92 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 HOXB6P17509 224 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 KDELR2P33947 212 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 PTGER1P34995 402 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 KHKP50053 298 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 PRKAG1P54619 331 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 CASP9P55211 416 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 MRPS35P82673 323 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 CDK6Q00534 326 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 KCNC4Q03721 635 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 KIF26BQ2KJY2 2108 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 NKAIN1Q4KMZ8 207 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 C3orf38Q5JPI3 329 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 INTS11Q5TA45 600 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 ZCCHC12Q6PEW1 402 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 FAM111BQ6SJ93 734 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 PLPP5Q8NEB5 264 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 CANT1Q8WVQ1 401 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 RIT1Q92963 219 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 PPWD1Q96BP3 646 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 GIMAP5Q96F15 307 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 MAGED4Q96JG8 741 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 PTCHD1Q96NR3 888 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 DGAT2Q96PD7 388 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 MS4A4EQ96PG1 132 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 EFHD1Q9BUP0 239 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 ACTRT3Q9BYD9 372 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 OR51I1Q9H343 314 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 SERHL2Q9H4I8 314 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 CXorf21Q9HAI6 301 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 NECTIN3Q9NQS3 549 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 SLC22A11Q9NSA0 550 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 DCAF13Q9NV06 445 aaKnown RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 OLAHQ9NV23 265 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 NKX1-2Q9UD57 310 aaPredicted RBP12.57□□□□□ -0.4
VMP1-217ENST00000593168 ZNF639Q9UID6 485 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 SATB2Q9UPW6 733 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 AP4S1Q9Y587 144 aa12.57□□□□□ -0.4
VMP1-217ENST00000593168 PIEZO2Q9H5I5 2752 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 IGKV3D-11A0A0A0MRZ8 115 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 PMS2P1A4D2B8 440 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 DUXAA6NLW8 204 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 AGRPO00253 132 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 HMGN4O00479 90 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ASNA1O43681 348 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 SLC28A2O43868 658 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 JRKO75564 520 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 WISP1O95388 367 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ALBP02768 609 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 TFPTP0C1Z6 253 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 CT62P0C5K7 136 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ANPEPP15144 967 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 AGXTP21549 392 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms