RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SPACA9Q96E40 222 aaPredicted RBP10.62□□□□□ -0.71
VMP1-211ENST00000591315 WDR55Q9H6Y2 383 aaPredicted RBP10.62□□□□□ -0.71
VMP1-211ENST00000591315 MANSC1Q9H8J5 431 aa10.62□□□□□ -0.71
VMP1-211ENST00000591315 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
VMP1-211ENST00000591315 GIMAP4Q9NUV9 329 aa10.62□□□□□ -0.71
VMP1-211ENST00000591315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.62□□□□□ -0.71
VMP1-211ENST00000591315 SH3BP4Q9P0V3 963 aa10.62□□□□□ -0.71
VMP1-211ENST00000591315 NPIPA1Q9UND3 350 aa10.62□□□□□ -0.71
VMP1-211ENST00000591315 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.62□□□□□ -0.71
VMP1-211ENST00000591315 WBP11Q9Y2W2 641 aaKnown RBP10.62□□□□□ -0.71
VMP1-211ENST00000591315 PCDHGB6Q9Y5F9 930 aa10.62□□□□□ -0.71
VMP1-211ENST00000591315 UNC5CO95185 931 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 EDN3P14138 238 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 MPIP34949 423 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 GSTM5P46439 218 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 OCRLQ01968 901 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 ALDH6A1Q02252 535 aaKnown RBP10.61□□□□□ -0.71
VMP1-211ENST00000591315 HSPB3Q12988 150 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 INAQ16352 499 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 PRAMEF20Q5VT98 475 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 HLA-DQA1Q5Y7H0 255 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 RTL4Q6ZR62 310 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 MAVSQ7Z434 540 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 WDR75Q8IWA0 830 aaKnown RBP10.61□□□□□ -0.71
VMP1-211ENST00000591315 ST6GALNAC3Q8NDV1 305 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 OR2M7Q8NG81 312 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 OR4N2Q8NGD1 307 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 SLC22A8Q8TCC7 542 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 PPCDCQ96CD2 204 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 VIPAS39Q9H9C1 493 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 FOLH1BQ9HBA9 442 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 TIMMDC1Q9NPL8 285 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 THAP1Q9NVV9 213 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 ARGLU1Q9NWB6 273 aaPredicted RBP10.61□□□□□ -0.71
VMP1-211ENST00000591315 TUBA8Q9NY65 449 aaPredicted RBP10.61□□□□□ -0.71
VMP1-211ENST00000591315 ATP6V1HQ9UI12 483 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 OSGIN2Q9Y236 505 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 KLF13Q9Y2Y9 288 aaPredicted RBP10.61□□□□□ -0.71
VMP1-211ENST00000591315 TMED5Q9Y3A6 229 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 HRH3Q9Y5N1 445 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 NPFFR2Q9Y5X5 522 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 DOPEY1Q5JWR5 2465 aa10.61□□□□□ -0.71
VMP1-211ENST00000591315 PCNX3Q9H6A9 2034 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 GOLGA8QA0A0J9YX86 632 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CLEC18AA5D8T8 446 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 GOLGA8OA6NCC3 632 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 FAM166BA8MTA8 275 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 GOLGA8NF8WBI6 632 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 UPK1AO00322 258 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 SCAMP2O15127 329 aaKnown RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 PDPK1O15530 556 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 HS6ST1O60243 411 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 PLOD3O60568 738 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CRYABP02511 175 aaKnown RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 CT45A8P0DMV1 189 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CT45A9P0DMV2 189 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 ABCD3P28288 659 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 NTSP30990 170 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 NME5P56597 212 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 FOXO1Q12778 655 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CT45A2Q5DJT8 189 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CLEC18BQ6UXF7 455 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 GFRALQ6UXV0 394 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 FGD2Q7Z6J4 655 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CHERPQ8IWX8 916 aaKnown RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 RIMKLAQ8IXN7 391 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 GPALPP1Q8IXQ4 340 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 ZFP62Q8NB50 900 aaPredicted RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 CLEC18CQ8NCF0 446 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 OR52N2Q8NGI0 321 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 DNAJB8Q8NHS0 232 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 TP53INP1Q96A56 240 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 ELP4Q96EB1 424 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 LCORQ96JN0 433 aaPredicted RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 VSTM2LQ96N03 204 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 DEFB127Q9H1M4 99 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 SLCO1B3Q9NPD5 702 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 SEC14L3Q9UDX4 400 aa10.6□□□□□ -0.71
VMP1-211ENST00000591315 CNOT11Q9UKZ1 510 aaKnown RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 GPR55Q9Y2T6 319 aaPredicted RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 CHCHD2Q9Y6H1 151 aaPredicted RBP10.6□□□□□ -0.71
VMP1-211ENST00000591315 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 C9JVG2 144 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 KLRC4-KLRK1H3BQV0 150 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 CDK2AP1O14519 115 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 ZNF195O14628 629 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 TBX19O60806 448 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 PDE9AO76083 593 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 ABCB1P08183 1280 aaPredicted RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 CELA3AP09093 270 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 ALDOCP09972 364 aaKnown RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 ZNF24P17028 368 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 CNR1P21554 472 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 PPICP45877 212 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 ASMTP46597 345 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 EMX2Q04743 252 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 ZNF155Q12901 538 aaPredicted RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 NTRK2Q16620 822 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 SLC9B1Q4ZJI4 515 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms