RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ITPAQ9BY32 194 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 UGT2B28Q9BY64 529 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 MAT2BQ9NZL9 334 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 KLRF1Q9NZS2 232 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 CRIM1Q9NZV1 1036 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 PRODH2Q9UF12 536 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 FOXD3Q9UJU5 478 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 EDARQ9UNE0 448 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 DOCK7Q96N67 2140 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 A0A1B0GTL3 188 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 A8MT66 165 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 KDM4EB2RXH2 506 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 PPP6CO00743 305 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 ESRRBO95718 433 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 SNRPAP09012 282 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 TAC1P20366 129 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 PTPN6P29350 595 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 DCAF7P61962 342 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 TRA2BP62995 288 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 PLCXD2Q0VAA5 305 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 SNTA1Q13424 505 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 RCAN2Q14206 197 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 FBXL19-AS1Q494R0 122 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 FLYWCH1Q4VC44 716 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 MMP21Q8N119 569 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 C1orf52Q8N6N3 182 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 FAM83FQ8NEG4 500 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 OR52R1Q8NGF1 315 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 FAM222BQ8WU58 562 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 NINJ1Q92982 152 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 C16orf45Q96MC5 204 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 SH3GL2Q99962 352 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 OSBPL11Q9BXB4 747 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 C1QTNF3Q9BXJ4 246 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 CLEC4MQ9H2X3 399 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 EPB41L4BQ9H329 900 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 PFDN4Q9NQP4 134 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 RASSF1Q9NS23 344 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 VPS29Q9UBQ0 182 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 TRPS1Q9UHF7 1281 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 DMGDHQ9UI17 866 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF639Q9UID6 485 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 MED12Q93074 2177 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 ABCA4P78363 2273 aa16.38■□□□□ 0.21
PRKCSH-211ENST00000590098 CD8B2A6NJW9 211 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 ICOSLGO75144 302 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 OR4F21O95013 312 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 ACTL6AO96019 429 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 KRT6AP02538 564 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 KRT6BP04259 564 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 RHOXF2BP0C7M4 288 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 DRD5P21918 477 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 HSD17B3P37058 310 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 KRT6CP48668 564 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF136P52737 540 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 CLCQ05315 142 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 TRMT12Q53H54 448 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 TMEM81Q6P7N7 255 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 YRDCQ86U90 279 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 CDYL2Q8N8U2 506 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 GOT1L1Q8NHS2 421 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 HGDQ93099 445 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 RMND5BQ96G75 393 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 WDYHV1Q96HA8 205 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 NODALQ96S42 347 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 HBEGFQ99075 208 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 CALHM2Q9HA72 323 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 FETUBQ9UGM5 382 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 UTS2RQ9UKP6 389 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 PLLPQ9Y342 182 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 KIAA1549Q9HCM3 1950 aa16.37■□□□□ 0.21
PRKCSH-211ENST00000590098 PRRC2AP48634 2157 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 NIPBLQ6KC79 2804 aaeCLIP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 C2orf72A6NCS6 295 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 A6NNC1 897 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 SNPHO15079 494 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 BCAS2O75934 225 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 SUPT7LO94864 414 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CBX7O95931 251 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 SBK3P0C264 359 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CYP4B1P13584 511 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 HSD3B1P14060 373 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CTSSP25774 331 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 HSD3B2P26439 372 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 OPRM1P35372 400 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 PPICP45877 212 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 NAGLUP54802 743 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 RASA2Q15283 850 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 LTB4RQ15722 352 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 DCST1Q5T197 706 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 DESI1Q6ICB0 168 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 FAM180BQ6P0A1 224 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 KIF18BQ86Y91 864 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 NOA1Q8NC60 698 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CHDHQ8NE62 594 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 OR14L1PQ8NHC6 308 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF592Q92610 1267 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CTHRC1Q96CG8 243 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms