RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZDHHC12Q96GR4 267 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 AHCYL2Q96HN2 611 aaKnown RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 MUS81Q96NY9 551 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PIP5K1AQ99755 562 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 TREX2Q9BQ50 279 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 ACTRT3Q9BYD9 372 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 RBCK1Q9BYM8 510 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 ING2Q9H160 280 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 KRT84Q9NSB2 600 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 DNAAF2Q9NVR5 837 aaKnown RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 HCN3Q9P1Z3 774 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 SEC14L3Q9UDX4 400 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 KLHL3Q9UH77 587 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 ZNF451Q9Y4E5 1061 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 LYVE1Q9Y5Y7 322 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 GPC6Q9Y625 555 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 ENPP4Q9Y6X5 453 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 SPTBN2O15020 2390 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 COL5A1P20908 1838 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 FER1L5A0AVI2 2057 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 A0A0A6YYC8 382 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 A0A0G2JPF8 293 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 VGLL3A8MV65 326 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 HNRNPCL2B2RXH8 293 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 I3L1I5 382 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CYR61O00622 381 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CHST10O43529 356 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ASNA1O43681 348 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 SRPX2O60687 465 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 UGT2B11O75310 529 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 MED26O95402 600 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 GPR75O95800 540 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 RECKO95980 971 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 FESP07332 822 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ALDH4A1P30038 563 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CTSKP43235 329 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 RPL5P46777 297 aaKnown RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 KCNJ5P48544 419 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 SKP1P63208 163 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 HPCAP84074 193 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 FOXD4Q12950 439 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 BNIP3Q12983 259 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 SRSF5Q13243 272 aaKnown RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 DUSP7Q16829 419 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 FAM214AQ32MH5 1076 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 LIN52Q52LA3 116 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF628Q5EBL2 1059 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 PRAMEF8Q5VWM4 474 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 PRAMEF7Q5VXH5 474 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 FOXB2Q5VYV0 432 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 KDM4DQ6B0I6 523 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 MFSD12Q6NUT3 480 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CDC73Q6P1J9 531 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 FAHD1Q6P587 224 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 DEF8Q6ZN54 512 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 WDR53Q7Z5U6 358 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 THAP5Q7Z6K1 395 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 HMGN2P46Q86SG4 172 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 SATL1Q86VE3 508 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 WDR5BQ86VZ2 330 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 SHISA5Q8N114 240 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ARHGEF39Q8N4T4 335 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 Q8N9G6 341 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-206ENST00000588860 OR10G2Q8NGC3 310 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 OR52J3Q8NH60 311 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ADAMTS15Q8TE58 950 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 DOK4Q8TEW6 326 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CDS1Q92903 461 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 GIMAP5Q96F15 307 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF354BQ96LW1 612 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CD180Q99467 661 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 SPATA5L1Q9BVQ7 753 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 ERVMER34-1Q9H9K5 563 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 BCL2L10Q9HD36 194 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 PDE7BQ9NP56 450 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CALML5Q9NZT1 146 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 PTGFRNQ9P2B2 879 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 LRIT1Q9P2V4 623 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 RHCGQ9UBD6 479 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 PLCL2Q9UPR0 1127 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 LIPT1Q9Y234 373 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 KCNE3Q9Y6H6 103 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 CSNK1G3Q9Y6M4 447 aa8.21□□□□□ -1.1
SMAD4-206ENST00000588860 GPR179Q6PRD1 2367 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 A0A087WXM4 84 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 IGHV5-51A0A0C4DH38 117 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 CCDC163A0A0D9SF12 145 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 LOC100130705A0A1B0GUX0 176 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 HYKKA2RU49 373 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 M0R3H8 397 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 SLC16A6O15403 523 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 DUX1O43812 170 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 OR10H2O60403 315 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 NME6O75414 186 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 JRKO75564 520 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 CCNB2O95067 398 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms