RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 PPM1BO75688 479 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 LRATO95237 230 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 ABCB1P08183 1280 aaPredicted RBP17.61■□□□□ 0.41
CCDC130-209ENST00000588809 EMDP50402 254 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 NAGLUP54802 743 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 NUP107P57740 925 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 RPP38P78345 283 aaKnown RBP17.61■□□□□ 0.41
CCDC130-209ENST00000588809 HEPACAMQ14CZ8 416 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 LTB4RQ15722 352 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 TRMT12Q53H54 448 aaKnown RBP17.61■□□□□ 0.41
CCDC130-209ENST00000588809 ZNF628Q5EBL2 1059 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 FNDC7Q5VTL7 733 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 BICRALQ6AI39 1079 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 RTL6Q6ICC9 239 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 FAM180BQ6P0A1 224 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 TRIM46Q7Z4K8 759 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 OR5M9Q8NGP3 310 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 LILRB4Q8NHJ6 448 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 NEIL3Q8TAT5 605 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 C16orf78Q8WTQ4 265 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 HSPBAP1Q96EW2 488 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 LCORQ96JN0 433 aaPredicted RBP17.61■□□□□ 0.41
CCDC130-209ENST00000588809 RILPQ96NA2 401 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 SPOCK3Q9BQ16 436 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 ITPAQ9BY32 194 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 ANKZF1Q9H8Y5 726 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 BCAP29Q9UHQ4 241 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 PLLPQ9Y342 182 aa17.61■□□□□ 0.41
CCDC130-209ENST00000588809 HOXD4P09016 255 aaPredicted RBP17.6■□□□□ 0.41
CCDC130-209ENST00000588809 IGFBP2P18065 325 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 KRT4P19013 534 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 DRD5P21918 477 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 CASP3P42574 277 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 PPICP45877 212 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 DCAF7P61962 342 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 MRPS35P82673 323 aaKnown RBP17.6■□□□□ 0.41
CCDC130-209ENST00000588809 SLC18A2Q05940 514 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 PMPCAQ10713 525 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 WLSQ5T9L3 541 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 TMEM198Q66K66 360 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 B3GNT6Q6ZMB0 384 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 PRR22Q8IZ63 422 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 OR52R1Q8NGF1 315 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCDC130-209ENST00000588809 TTYH2Q9BSA4 534 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 TNFRSF10DQ9UBN6 386 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 PRODH2Q9UF12 536 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 ACAD8Q9UKU7 415 aa17.6■□□□□ 0.41
CCDC130-209ENST00000588809 KIAA1549Q9HCM3 1950 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 COPEO14579 308 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 TO15178 435 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 BCAS2O75934 225 aaPredicted RBP17.59■□□□□ 0.41
CCDC130-209ENST00000588809 ANXA4P09525 319 aaPredicted RBP17.59■□□□□ 0.41
CCDC130-209ENST00000588809 CPA3P15088 417 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 PCSK2P16519 638 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 TFF3Q07654 80 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 ZNF763Q0D2J5 394 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 NNATQ16517 81 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 ZNF585AQ6P3V2 769 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 NUP54Q7Z3B4 507 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 PACS2Q86VP3 889 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 ZNF295-AS1Q8N0V1 137 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 FAM76AQ8TAV0 307 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 HGDQ93099 445 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 TMEM41AQ96HV5 264 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 JSRP1Q96MG2 331 aaPredicted RBP17.59■□□□□ 0.41
CCDC130-209ENST00000588809 BTBD9Q96Q07 612 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 SLC6A15Q9H2J7 730 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 TNFRSF12AQ9NP84 129 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 SLC35C2Q9NQQ7 365 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 MKS1Q9NXB0 559 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 GPR55Q9Y2T6 319 aaPredicted RBP17.59■□□□□ 0.41
CCDC130-209ENST00000588809 PCNX3Q9H6A9 2034 aa17.59■□□□□ 0.41
CCDC130-209ENST00000588809 MAP1AP78559 2803 aaPredicted RBP17.58■□□□□ 0.41
CCDC130-209ENST00000588809 FRG2CA6NGY1 282 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 SMIM23A6NLE4 172 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 HPNP05981 417 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 SNRPB2P08579 225 aaKnown RBP17.58■□□□□ 0.4
CCDC130-209ENST00000588809 GLI4P10075 376 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 GABRA1P14867 456 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 GDF1P27539 372 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 SNTA1Q13424 505 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 CFAP157Q5JU67 520 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 LIPMQ5VYY2 423 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 SCIMPQ6UWF3 145 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 CCDC116Q8IYX3 515 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 EXOSC8Q96B26 276 aaKnown RBP17.58■□□□□ 0.4
CCDC130-209ENST00000588809 OMA1Q96E52 524 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 METTL2AQ96IZ6 378 aaKnown RBP17.58■□□□□ 0.4
CCDC130-209ENST00000588809 EBPLQ9BY08 206 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 C12orf65Q9H3J6 166 aaKnown RBP17.58■□□□□ 0.4
CCDC130-209ENST00000588809 EXO5Q9H790 373 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 MYNNQ9NPC7 610 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 C15orf41Q9Y2V0 281 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 WBP11Q9Y2W2 641 aaKnown RBP17.58■□□□□ 0.4
CCDC130-209ENST00000588809 CCL27Q9Y4X3 112 aa17.58■□□□□ 0.4
CCDC130-209ENST00000588809 TEP1Q99973 2627 aaKnown RBP17.58■□□□□ 0.4
CCDC130-209ENST00000588809 SPG11Q96JI7 2443 aa17.57■□□□□ 0.4
CCDC130-209ENST00000588809 NPIPB8E9PQR5 432 aa17.57■□□□□ 0.4
CCDC130-209ENST00000588809 PLOD3O60568 738 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms