RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CELA2AP08217 269 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 SNRPB2P08579 225 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ZCCHC18P0CG32 403 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 UQCRC2P22695 453 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 MC3RP41968 323 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ANXA11P50995 505 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 PRKAG1P54619 331 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 PSMD4P55036 377 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 HBA1P69905 142 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 RPP38P78345 283 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ARG2P78540 354 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 MRPS22P82650 360 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 MRPS35P82673 323 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 STX5Q13190 355 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 RAPSNQ13702 412 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 EXOSC7Q15024 291 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 TLR1Q15399 786 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 CYP27C1Q4G0S4 372 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 GKAP1Q5VSY0 366 aaPredicted RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 LINC00696Q6ZRV3 163 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 C9orf40Q8IXQ3 194 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF321PQ8N8H1 164 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ANKS4BQ8N8V4 417 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF441Q8N8Z8 693 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 TEX19Q8NA77 164 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 OR7G2Q8NG99 324 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ASB15Q8WXK1 588 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ADIPOR1Q96A54 375 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 TMEM125Q96AQ2 219 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 MARK4Q96L34 752 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 VSTM2LQ96N03 204 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 MS4A4EQ96PG1 132 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 BTBD9Q96Q07 612 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 CCT8L2Q96SF2 557 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 SECISBP2Q96T21 854 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 FAM107BQ9H098 131 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF385DQ9H6B1 395 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 SAR1AQ9NR31 198 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ZCCHC3Q9NUD5 404 aaKnown RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 VPS4AQ9UN37 437 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 FAF1Q9UNN5 650 aaPredicted RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 GPR55Q9Y2T6 319 aaPredicted RBP8.4□□□□□ -1.06
CIRBP-218ENST00000588344 ARL2BPQ9Y2Y0 163 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 SCN3AQ9NY46 2000 aa8.4□□□□□ -1.06
CIRBP-218ENST00000588344 TRAV17A0A0B4J275 112 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 OR5H15A6NDH6 313 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 FRG2CA6NGY1 282 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 TMEM200CA6NKL6 621 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 BBIP1A8MTZ0 92 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 A8MVJ9 347 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 MASP2O00187 686 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 WWP2O00308 870 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 DCTN3O75935 186 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 ANP32DO95626 131 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CPSF4O95639 269 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 KRT75O95678 551 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 WDPCPO95876 746 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 NPPAP01160 153 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 ABCB1P08183 1280 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CT45A8P0DMV1 189 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CT45A9P0DMV2 189 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CD46P15529 392 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 PPIBP23284 216 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 LCN1P31025 176 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 SOX18P35713 384 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 KRT20P35900 424 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CD96P40200 585 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 NR0B1P51843 470 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 DGKQP52824 942 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 PHC1P78364 1004 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 OC90Q02509 493 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CT45A2Q5DJT8 189 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 COQ5Q5HYK3 327 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 B3GNTL1Q67FW5 361 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 RPUSD3Q6P087 351 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 ZNF621Q6ZSS3 439 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 NUP54Q7Z3B4 507 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 C6orf120Q7Z4R8 191 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 FUNDC1Q8IVP5 155 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 BEST3Q8N1M1 668 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 EXD3Q8N9H8 876 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 GOLM1Q8NBJ4 401 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 THAP3Q8WTV1 239 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CMTM5Q96DZ9 223 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 FAM120BQ96EK7 910 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 MAGED4Q96JG8 741 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 PHF12Q96QT6 1004 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 GAL3ST4Q96RP7 486 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 RASL10BQ96S79 203 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 STACQ99469 402 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 ACTRT3Q9BYD9 372 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 CXorf36Q9H7Y0 433 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 FOLH1BQ9HBA9 442 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 HHATLQ9HCP6 504 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 Q9N2J8 555 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 DUSP22Q9NRW4 184 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms