RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 LGI4Q8N135 537 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 GALNT15Q8N3T1 639 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 ZNF615Q8N8J6 731 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 TNIP2Q8NFZ5 429 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 NFKBIDQ8NI38 313 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 SLC2A12Q8TD20 617 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 FIG4Q92562 907 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 ACTRT3Q9BYD9 372 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 TMEM38AQ9H6F2 299 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 A4GALTQ9NPC4 353 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 ACTR3BQ9P1U1 418 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 BCAP29Q9UHQ4 241 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 MAGEL2Q9UJ55 1249 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 NXT1Q9UKK6 140 aaKnown RBP10.53□□□□□ -0.72
VMP1-207ENST00000588131 PADI1Q9ULC6 663 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 FAF1Q9UNN5 650 aaPredicted RBP10.53□□□□□ -0.72
VMP1-207ENST00000588131 DTX4Q9Y2E6 619 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 PTRH2Q9Y3E5 179 aaKnown RBP10.53□□□□□ -0.72
VMP1-207ENST00000588131 CCDC88CQ9P219 2028 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 ZFHX2Q9C0A1 2572 aaPredicted RBP10.53□□□□□ -0.72
VMP1-207ENST00000588131 TCRBV5S2A0A599 114 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 RAD1O60671 282 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 COQ9O75208 318 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 IGKV3-11P04433 115 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 TCN2P20062 427 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 PRIM2P49643 509 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 EMDP50402 254 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 POLE2P56282 527 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 RPS18P62269 152 aaKnown RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 CDK6Q00534 326 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 RBBP4Q09028 425 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 FUT5Q11128 374 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 ZNF155Q12901 538 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 SCARB2Q14108 478 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 MAP7Q14244 749 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 DUSP5Q16690 384 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 RPS26P11Q5JNZ5 115 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 TMEM205Q6UW68 189 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 OLIG3Q7RTU3 272 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 GALNT10Q86SR1 603 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SPATA24Q86W54 205 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 PROSER1Q86XN7 944 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SLC44A2Q8IWA5 706 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 ESX1Q8N693 406 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 ANKFN1Q8N957 763 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SLC16A11Q8NCK7 471 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 C11orf65Q8NCR3 313 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 C7orf57Q8NEG2 295 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 OR14A16Q8NHC5 309 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 ZNF721Q8TF20 911 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SLC38A5Q8WUX1 472 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 XAGE5Q8WWM1 108 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SLC9A6Q92581 669 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 JADE3Q92613 823 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 HOXB13Q92826 284 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 CDS1Q92903 461 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 NCLNQ969V3 563 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 C8orf44Q96CB5 159 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SLC35A4Q96G79 324 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SENP5Q96HI0 755 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 FBXL20Q96IG2 436 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 ZNF578Q96N58 590 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 SLC46A1Q96NT5 459 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 WDR77Q9BQA1 342 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 NUDT9Q9BW91 350 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 B3GNT4Q9C0J1 378 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 OR8D2Q9GZM6 311 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 OR10A5Q9H207 317 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 FOLH1BQ9HBA9 442 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 HEMK1Q9Y5R4 338 aaPredicted RBP10.52□□□□□ -0.73
VMP1-207ENST00000588131 CLCA3PQ9Y6N3 262 aa10.52□□□□□ -0.73
VMP1-207ENST00000588131 SAGE2PA6NJ88 616 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 CDRT15L2A8MXV6 281 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 TERTO14746 1132 aaKnown RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 ASNA1O43681 348 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 BRINP1O60477 761 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 PRAMEF2O60811 474 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 GCM2O75603 506 aaPredicted RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 CREG1O75629 220 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 KRT36O76013 467 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 STAMBPO95630 424 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 BCHEP06276 602 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 CYC1P08574 325 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 RAB40ALP0C0E4 278 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 TFPTP0C1Z6 253 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 AQP1P29972 269 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 MAP3K8P41279 467 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 FOLR3P41439 243 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 STAT5AP42229 794 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 MAGEA8P43361 318 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 SLC37A1P57057 533 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 VEZF1Q14119 521 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 MYBPC3Q14896 1274 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 SYPL1Q16563 259 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 ZNF630Q2M218 657 aaPredicted RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 NPSR1Q6W5P4 371 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 CPEB2Q7Z5Q1 589 aaKnown RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 NLGN4XQ8N0W4 816 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 CDRT4Q8N9R6 151 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms