RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TO15178 435 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 PDPK1O15530 556 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 SNNO75324 88 aaPredicted RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 AGFG2O95081 481 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 SNX4O95219 450 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 JUNP05412 331 aaKnown RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 STSP08842 583 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 PRPS1L1P21108 318 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 HPCAL1P37235 193 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 FRKP42685 505 aaPredicted RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 MANFP55145 182 aaKnown RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 CASP6P55212 293 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 GPR85P60893 370 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 MRPS35P82673 323 aaKnown RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 PLGLB1Q02325 96 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 MLC1Q15049 377 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 RPS6KA2Q15349 733 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 HYAL4Q2M3T9 481 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 PAOXQ6QHF9 649 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 NUP54Q7Z3B4 507 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 SLC22A16Q86VW1 577 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 SIAH3Q8IW03 269 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 GHDCQ8N2G8 530 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 OR2L13Q8N349 312 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 FBXW8Q8N3Y1 598 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 LIX1Q8N485 282 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 FAM13CQ8NE31 585 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 OR7G2Q8NG99 324 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 MGARPQ8TDB4 240 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 KAT2AQ92830 837 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 GFM2Q969S9 779 aaKnown RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 ELP4Q96EB1 424 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 BTBD9Q96Q07 612 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 SH3GL2Q99962 352 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 ITPAQ9BY32 194 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 NXF5Q9H1B4 397 aaKnown RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 ZNF395Q9H8N7 513 aaPredicted RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 IL1RL2Q9HB29 575 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 DEPPQ9NTK1 212 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 ATP6V1HQ9UI12 483 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 BOKQ9UMX3 212 aaPredicted RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 NPIPA1Q9UND3 350 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 SLC5A6Q9Y289 635 aa9.31□□□□□ -0.92
TPM4-207ENST00000588032 GPR55Q9Y2T6 319 aaPredicted RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 CHCHD2Q9Y6H1 151 aaPredicted RBP9.31□□□□□ -0.92
TPM4-207ENST00000588032 SHANK1Q9Y566 2161 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 TRPC5OSA6NMA1 111 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 TFECO14948 347 aaPredicted RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 SCAMP2O15127 329 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 AKAP10O43572 662 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 ERN1O75460 977 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 PPM1BO75688 479 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 LRATO95237 230 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 ABCB1P08183 1280 aaPredicted RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 CCL3P10147 92 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 LBPP18428 481 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 ABCD3P28288 659 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 PER3P56645 1201 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 CLDN8P56748 225 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 C21orf58P58505 322 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 PPIAP62937 165 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 KCNJ2P63252 427 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 MRPS22P82650 360 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 DUSP8Q13202 625 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 ZNHIT3Q15649 155 aaPredicted RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 PDCD2Q16342 344 aaPredicted RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 PRSS53Q2L4Q9 553 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 RNFT1Q5M7Z0 435 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 CPTPQ5TA50 214 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 TMEM81Q6P7N7 255 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 CEP70Q8NHQ1 597 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 SPPL2AQ8TCT8 520 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 DIO2Q92813 273 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 ARL8AQ96BM9 186 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 COQ8BQ96D53 544 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 VSTM2LQ96N03 204 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 AKTIPQ9H8T0 292 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 MEAF6Q9HAF1 191 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 C3orf14Q9HBI5 128 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 DDX18Q9NVP1 670 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 CNOT11Q9UKZ1 510 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 OSGIN2Q9Y236 505 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 DTX4Q9Y2E6 619 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.3□□□□□ -0.92
TPM4-207ENST00000588032 CFAP46Q8IYW2 2715 aa9.3□□□□□ -0.92
TPM4-207ENST00000588032 SMG1Q96Q15 3661 aaKnown RBP9.29□□□□□ -0.92
TPM4-207ENST00000588032 OR6C70A6NIJ9 312 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 UPK1AO00322 258 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 HDAC3O15379 428 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 HS6ST1O60243 411 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 SLC19A2O60779 497 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 GLSO94925 669 aaPredicted RBP9.29□□□□□ -0.92
TPM4-207ENST00000588032 SOX30O94993 753 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 PSMG1O95456 288 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 CT45A8P0DMV1 189 aa9.29□□□□□ -0.92
TPM4-207ENST00000588032 CT45A9P0DMV2 189 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms