RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PIGQQ9BRB3 760 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 UGT2B28Q9BY64 529 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 REXO4Q9GZR2 422 aaKnown RBP7.81□□□□□ -1.16
SDF2-204ENST00000587338 FAM107BQ9H098 131 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 MRPL46Q9H2W6 279 aaKnown RBP7.81□□□□□ -1.16
SDF2-204ENST00000587338 CALHM2Q9HA72 323 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 KLHL28Q9NXS3 571 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 RNF112Q9ULX5 631 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 DAPP1Q9UN19 280 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 SLC22A14Q9Y267 594 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 KCNE2Q9Y6J6 123 aa7.81□□□□□ -1.16
SDF2-204ENST00000587338 LRIT2A6NDA9 550 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 NCF1BA6NI72 391 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 NCF1CA8MVU1 366 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 DEFB108AA8MXU0 73 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 HRKO00198 91 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 CDC7O00311 574 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 DYRK3O43781 588 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 TRIM3O75382 744 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 WISP3O95389 354 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 S100BP04271 92 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 HPNP05981 417 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 CYP4B1P13584 511 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 GFAPP14136 432 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 NCF1P14598 390 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 LSP1P33241 339 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 SOX18P35713 384 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 ETV4P43268 484 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 MASP1P48740 699 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 SEC24CP53992 1094 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 NR1H2P55055 460 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 DIO3P55073 304 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 MTTPP55157 894 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 SF3A3Q12874 501 aaKnown RBP eCLIP7.8□□□□□ -1.16
SDF2-204ENST00000587338 SLBPQ14493 270 aaKnown RBP eCLIP7.8□□□□□ -1.16
SDF2-204ENST00000587338 OR4D1Q15615 310 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 TSNQ15631 228 aaKnown RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 EIPR1Q53HC9 387 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 TECRLQ5HYJ1 363 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 WIPI1Q5MNZ9 446 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 TBCELQ5QJ74 424 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 C10orf62Q5T681 223 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 ATG16L1Q676U5 607 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 BICRALQ6AI39 1079 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 HEPHL1Q6MZM0 1159 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 PLXDC2Q6UX71 529 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 TMIGD1Q6UXZ0 262 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 ZCCHC23Q6ZST2 131 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 CPLX4Q7Z7G2 160 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 ISCA2Q86U28 154 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 DND1Q8IYX4 353 aaKnown RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 SLC15A4Q8N697 577 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 TTLQ8NG68 377 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 OR2L5Q8NG80 312 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 STAG3L4Q8TBR4 150 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 RDH11Q8TC12 318 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 DOK4Q8TEW6 326 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 ZNF75CPQ92670 426 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 ABTB1Q969K4 478 aaPredicted RBP7.8□□□□□ -1.16
SDF2-204ENST00000587338 NTNG2Q96CW9 530 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 UBXN10Q96LJ8 280 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 RILPQ96NA2 401 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 GPR78Q96P69 363 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 GNRHR2Q96P88 292 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 DGAT2Q96PD7 388 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 HS3ST6Q96QI5 342 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 MED18Q9BUE0 208 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 DERL2Q9GZP9 239 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 UBQLN3Q9H347 655 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 MANSC1Q9H8J5 431 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 ZNF226Q9NYT6 803 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 C15orf41Q9Y2V0 281 aa7.8□□□□□ -1.16
SDF2-204ENST00000587338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.8□□□□□ -1.169e-12■■■■□ 24.7
SDF2-204ENST00000587338 GMNCA6NCL1 334 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 SYCE1LA8MT33 242 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 G3V2L1 256 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 H0Y3Z8 333 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 UBXN8O00124 270 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 TP53I11O14683 189 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 BIRC5O15392 142 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 PHF1O43189 567 aaPredicted RBP7.79□□□□□ -1.16
SDF2-204ENST00000587338 H2AFYO75367 372 aaKnown RBP7.79□□□□□ -1.16
SDF2-204ENST00000587338 SMNDC1O75940 238 aaKnown RBP eCLIP7.79□□□□□ -1.16
SDF2-204ENST00000587338 F12P00748 615 aaPredicted RBP7.79□□□□□ -1.16
SDF2-204ENST00000587338 IGKV3-11P04433 115 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 TP53P04637 393 aaPredicted RBP7.79□□□□□ -1.16
SDF2-204ENST00000587338 ENO2P09104 434 aaPredicted RBP7.79□□□□□ -1.16
SDF2-204ENST00000587338 DHRS4L1P0CG22 281 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 C1GALT1C1LP0DN25 315 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 ATP5F1P24539 256 aaPredicted RBP7.79□□□□□ -1.16
SDF2-204ENST00000587338 STT3AP46977 705 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 NAGLUP54802 743 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 SRYQ05066 204 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 FAM27E3Q08E93 113 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 STX3Q13277 289 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 TNK1Q13470 666 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 PCLAFQ15004 111 aa7.79□□□□□ -1.16
SDF2-204ENST00000587338 PDK4Q16654 411 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms