RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 RUBCNLQ9H714 662 aa19.12■□□□□ 0.65
ATG4D-204ENST00000586417 DDX18Q9NVP1 670 aaKnown RBP19.12■□□□□ 0.65
ATG4D-204ENST00000586417 PTGFRNQ9P2B2 879 aa19.12■□□□□ 0.65
ATG4D-204ENST00000586417 PCDHGB5Q9Y5G0 923 aa19.12■□□□□ 0.65
ATG4D-204ENST00000586417 KNTC1P50748 2209 aa19.12■□□□□ 0.65
ATG4D-204ENST00000586417 MYOCOSA0A1B0GUC4 107 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 EIF4E1BA6NMX2 242 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 HYAL3O43820 417 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 SLC28A2O43868 658 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 DPM1O60762 260 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 MFN2O95140 757 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 UBTFL6P0CB48 400 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 RNH1P13489 461 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 CD247P20963 164 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 ANXA11P50995 505 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 TXNL4AP83876 142 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 PPP2R2BQ00005 443 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 CDCP2Q5VXM1 449 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 CARM1Q86X55 608 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 ARMC8Q8IUR7 673 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 SIMC1Q8NDZ2 872 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 SPPL2AQ8TCT8 520 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 CNBD2Q96M20 576 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 OR7D2Q96RA2 312 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 IRAK4Q9NWZ3 460 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 SMPD3Q9NY59 655 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 NDUFAF4Q9P032 175 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 TMEM184BQ9Y519 407 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 KCNE3Q9Y6H6 103 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 U3KQV3 271 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 PIEZO1Q92508 2521 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 ASNA1O43681 348 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 NME6O75414 186 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 DKK1O94907 266 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 HPRP00739 348 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 LYNP07948 512 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 NOVA1P51513 510 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 MAT1AQ00266 395 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 GRM7Q14831 915 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 DUSP7Q16829 419 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 MFSD12Q6NUT3 480 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 APOBEC4Q8WW27 367 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 MS4A4EQ96PG1 132 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 ADI1Q9BV57 179 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 OSBPL10Q9BXB5 764 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 RBCK1Q9BYM8 510 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 ANKRD60Q9BZ19 345 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 CLK4Q9HAZ1 481 aaKnown RBP19.11■□□□□ 0.65
ATG4D-204ENST00000586417 BCL2L10Q9HD36 194 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 EQTNQ9NQ60 294 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 OCIAD1Q9NX40 245 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 USE1Q9NZ43 259 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 BAG5Q9UL15 447 aa19.11■□□□□ 0.65
ATG4D-204ENST00000586417 MAGEA13PA6NCF6 341 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 TMEM247A6NEH6 219 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 TMEM150CB9EJG8 249 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 E2F6O75461 281 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 PDE9AO76083 593 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 CHRM4P08173 479 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 NR2F1P10589 423 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 GCGRP47871 477 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 OR1E2P47887 323 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 MGAT2Q10469 447 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 MERTKQ12866 999 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 BLMHQ13867 455 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 SYT16Q17RD7 645 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 CYP27C1Q4G0S4 372 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 TRMT12Q53H54 448 aaKnown RBP19.1■□□□□ 0.65
ATG4D-204ENST00000586417 SHQ1Q6PI26 577 aaKnown RBP19.1■□□□□ 0.65
ATG4D-204ENST00000586417 GPR32P1Q8NGA4 272 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 OR1L3Q8NH93 324 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 GEMIN6Q8WXD5 167 aaKnown RBP19.1■□□□□ 0.65
ATG4D-204ENST00000586417 SDCCAG3Q96C92 435 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 RNF31Q96EP0 1072 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 PEX11GQ96HA9 241 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 ACTRT3Q9BYD9 372 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 THSD1Q9NS62 852 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 FGF21Q9NSA1 209 aa19.1■□□□□ 0.65
ATG4D-204ENST00000586417 CDV3Q9UKY7 258 aaKnown RBP19.1■□□□□ 0.65
ATG4D-204ENST00000586417 C19orf53Q9UNZ5 99 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-204ENST00000586417 GPC6Q9Y625 555 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-204ENST00000586417 A0A087WV62 115 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 TGFBR3LH3BV60 316 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 SNAP29O95721 258 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 IFI6P09912 130 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 MSL3P1P0C860 447 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CEACAM1P13688 526 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 PPP2R1BP30154 601 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 TRA2AQ13595 282 aaKnown RBP eCLIP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 RSPO4Q2I0M5 234 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 ISXQ2M1V0 245 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 PRICKLE4Q2TBC4 344 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 SLC36A3Q495N2 470 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 HES3Q5TGS1 186 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 PRAMEF17Q5VTA0 474 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 ANKRD34AQ69YU3 496 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 OLIG3Q7RTU3 272 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 HIPK1Q86Z02 1210 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 METTL27Q8N6F8 245 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 ZNF675Q8TD23 568 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms