RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 EVA1BQ9NVM1 165 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 KLHL28Q9NXS3 571 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 FBXL21Q9UKT6 434 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 IFT52Q9Y366 437 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 PCDHGA6Q9Y5G7 932 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 A0A087WV62 115 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 LOC105369274A0A096LPK9 316 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 LOC102723532A0A0G2JNH3 316 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 PRAMEF27A3QJZ7 478 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 WASHC1A8K0Z3 465 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 J3KTA2 159 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 TLR4O00206 839 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 PCDH17O14917 1159 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 B4GAT1O43505 415 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 RGS10O43665 173 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 SRPX2O60687 465 aaPredicted RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 GALR3O60755 368 aaPredicted RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 UGT2B17O75795 530 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 UBXN7O94888 489 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 GPR75O95800 540 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 AK1P00568 194 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 EIF2S1P05198 315 aaKnown RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 PROS1P07225 676 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 CPMP14384 443 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 PVRP15151 417 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 ELAVL4P26378 380 aaKnown RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 SLC5A2P31639 672 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 NBL1P41271 181 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 MAN2A2P49641 1150 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 NUBP1P53384 320 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 CDC42P60953 191 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 HNRNPKP61978 463 aaKnown RBP eCLIP10.57□□□□□ -0.72
LIG3-204ENST00000585740 SLC35A2P78381 396 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 FZD5Q13467 585 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 GANABQ14697 944 aaKnown RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 ZNF750Q32MQ0 723 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 CYP27C1Q4G0S4 372 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 XAF1Q6GPH4 301 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 HEPHL1Q6MZM0 1159 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 MFSD12Q6NUT3 480 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 DEF8Q6ZN54 512 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 OR4N4Q8N0Y3 316 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 OR2L13Q8N349 312 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 SPEM1Q8N4L4 309 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 C19orf47Q8N9M1 422 aaKnown RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 AQP11Q8NBQ7 271 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 RLN3Q8WXF3 142 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 PMM1Q92871 262 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 MUL1Q969V5 352 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 GIMAP5Q96F15 307 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 PRRC1Q96M27 445 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 ARHGDIGQ99819 225 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 YIPF4Q9BSR8 244 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 DGCR6LQ9BY27 220 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 UCK2Q9BZX2 261 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 EVA1AQ9H8M9 152 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 NMNAT1Q9HAN9 279 aaPredicted RBP10.57□□□□□ -0.72
LIG3-204ENST00000585740 ANKHQ9HCJ1 492 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 TIMMDC1Q9NPL8 285 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 DSPPQ9NZW4 1301 aa10.57□□□□□ -0.72
LIG3-204ENST00000585740 VPS13AQ96RL7 3174 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 A0A1W2PRQ8 180 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ZNF99A8MXY4 864 aaPredicted RBP10.56□□□□□ -0.72
LIG3-204ENST00000585740 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 WNT1P04628 370 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ATP1B1P05026 303 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ALPPL2P10696 532 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 TYRP1P17643 537 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 PRKAR1BP31321 381 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 FMO3P31513 532 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 IFNGR2P38484 337 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 CRISP1P54107 249 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 VSX2P58304 361 aaPredicted RBP10.56□□□□□ -0.72
LIG3-204ENST00000585740 SIM1P81133 766 aaPredicted RBP10.56□□□□□ -0.72
LIG3-204ENST00000585740 ALDH6A1Q02252 535 aaKnown RBP10.56□□□□□ -0.72
LIG3-204ENST00000585740 FUT5Q11128 374 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 COX10Q12887 443 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 DGCR6Q14129 220 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 NPTX1Q15818 432 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ARHGAP11BQ3KRB8 267 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ZNF628Q5EBL2 1059 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ZNF311Q5JNZ3 666 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 FGD3Q5JSP0 725 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 GPR107Q5VW38 600 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ZNF770Q6IQ21 691 aaPredicted RBP10.56□□□□□ -0.72
LIG3-204ENST00000585740 PRSS48Q7RTY5 328 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ENTHD1Q8IYW4 607 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 CA13Q8N1Q1 262 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ARL14Q8N4G2 192 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ZNF540Q8NDQ6 660 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 OR9Q2Q8NGE9 314 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 RHOXF1Q8NHV9 184 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 VANGL1Q8TAA9 524 aaPredicted RBP10.56□□□□□ -0.72
LIG3-204ENST00000585740 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 ZNF675Q8TD23 568 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 LMX1AQ8TE12 382 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 RAB2BQ8WUD1 216 aa10.56□□□□□ -0.72
LIG3-204ENST00000585740 FCGR1BQ92637 280 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms