RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TAF3Q5VWG9 929 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIM65Q6PJ69 517 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 UNC5DQ6UXZ4 953 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM182Q6ZP80 229 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 EID3Q8N140 333 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC24A4Q8NFF2 622 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 OR2T3Q8NH03 318 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 VANGL1Q8TAA9 524 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 GIPC3Q8TF64 312 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 NT5C3BQ969T7 300 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 MYLPFQ96A32 169 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 EGLN2Q96KS0 407 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 RAB11FIP5Q9BXF6 653 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ATG10Q9H0Y0 220 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 DPAGT1Q9H3H5 408 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CDH20Q9HBT6 801 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 THSD1Q9NS62 852 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC35D1Q9NTN3 355 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 DUS2Q9NX74 493 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 RABL2AQ9UBK7 228 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 XPO7Q9UIA9 1087 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TSPAN16Q9UKR8 245 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC9A8Q9Y2E8 581 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CENPFP49454 3210 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 A0A1W2PRB8 838 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF840PA6NDX5 716 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SGK1O00141 431 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 LSM1O15116 133 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GPR137BO60478 399 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CLDN7O95471 211 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 DIRAS3O95661 229 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TGFAP01135 160 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 IGLV3-25P01717 112 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GP1BAP07359 652 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ALPIP09923 528 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MBL2P11226 248 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TCF4P15884 667 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 UGT1A6P19224 532 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 POLR2EP19388 210 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AGAP20933 346 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CBLP22681 906 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NMT1P30419 496 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SERPINB1P30740 379 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RPL22P35268 128 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CXCR3P49682 368 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 THBS3P49746 956 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ARFIP1P53367 373 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GEMP55040 296 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 DCDC1P59894 354 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 EEF1A2Q05639 463 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF33BQ06732 778 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TWF1Q12792 350 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SCGB2A2Q13296 93 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 INPP5JQ15735 1006 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 IL17AQ16552 155 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ZRANB3Q5FWF4 1079 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CDKL4Q5MAI5 379 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PRAMEF8Q5VWM4 474 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJC24Q6P3W2 148 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SCYL2Q6P3W7 929 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PLEKHM3Q6ZWE6 761 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GLRX5Q86SX6 157 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TSPAN33Q86UF1 283 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KMT5CQ86Y97 462 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SERPINA12Q8IW75 414 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 UMODL1-AS1Q8N2C9 162 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RASGEF1CQ8N431 466 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MNS1Q8NEH6 495 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIM58Q8NG06 486 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 OR4C15Q8NGM1 316 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 OR13C3Q8NGS6 347 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 OR4A16Q8NH70 328 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM3CQ92520 227 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 DPF1Q92782 380 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KAT2AQ92830 837 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NAT6Q93015 286 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF707Q96C28 371 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC39Q96DD0 335 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 EPSTI1Q96J88 318 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CXorf58Q96LI9 332 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TCEANC2Q96MN5 208 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 LRFN5Q96NI6 719 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 IP6K3Q96PC2 410 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIB3Q96RU7 358 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AGPAT1Q99943 283 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ZYG11BQ9C0D3 744 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CHRNA10Q9GZZ6 450 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CPVLQ9H3G5 476 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 LIN28AQ9H9Z2 209 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MRM3Q9HC36 420 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CENPMQ9NSP4 180 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TAS2R3Q9NYW6 316 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TEKT2Q9UIF3 430 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJC12Q9UKB3 198 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AMDHD2Q9Y303 409 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 STON1Q9Y6Q2 735 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CFAP54Q96N23 3096 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PRRC2BQ5JSZ5 2229 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KIR2DS5A0A0G2JLQ3 304 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PRSS51A0A1B0GVH4 220 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms