RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CHCHD3Q9NX63 227 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 BTNL2Q9UIR0 455 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 KIAA1671Q9BY89 1806 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 ZFHX4Q86UP3 3567 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 KLHL33A6NCF5 533 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 HMGN4O00479 90 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 UBXN7O94888 489 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 PROS1P07225 676 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CT62P0C5K7 136 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 NOS3P29474 1203 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CNR2P34972 360 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CXCL12P48061 93 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SEC23BQ15437 767 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 FAM199XQ6PEV8 388 aaPredicted RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 PAQR6Q6TCH4 344 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 FAM9CQ8IZT9 166 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 OR4K14Q8NGD5 310 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 TSLPQ969D9 159 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 QRFPRQ96P65 431 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 ZNF559Q9BR84 538 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 C6orf62Q9GZU0 229 aaPredicted RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 POLR2J3Q9H1A7 115 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 PRAMEF27A3QJZ7 478 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CHST10O43529 356 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 PIP5K1CO60331 668 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 BCAS1O75363 584 aaPredicted RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 TRMUO75648 421 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 NCS1P62166 190 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 GGTA1PQ4G0N0 100 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 DCST1Q5T197 706 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SPATC1Q76KD6 591 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 MCATQ8IVS2 390 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 MARVELD2Q8N4S9 558 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 OR2L8Q8NGY9 312 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SETD7Q8WTS6 366 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 C8orf44Q96CB5 159 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 LHPPQ9H008 270 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 IL1RAPQ9NPH3 570 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 PRDM7Q9NQW5 492 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SELENOWP63302 87 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 PUM1Q14671 1186 aaKnown RBP eCLIP9.65□□□□□ -0.86
RFFL-212ENST00000584655 DUSP5Q16690 384 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 CRB2Q5IJ48 1285 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 LAIR1Q6GTX8 287 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 EID2Q8N6I1 236 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 OR52N2Q8NGI0 321 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 C12orf43Q96C57 262 aaKnown RBP9.65□□□□□ -0.86
RFFL-212ENST00000584655 DACH2Q96NX9 599 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 NODALQ96S42 347 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 GABRG3Q99928 467 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 TMEM185BQ9H7F4 350 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 BRF2Q9HAW0 419 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 TRPV4Q9HBA0 871 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 ANKRD10Q9NXR5 420 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 FANCMQ8IYD8 2048 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 A0A087WXM4 84 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 IGHV1OR15-9A0A0B4J2B8 117 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 SPTY2D1-AS1A0A0U1RR47 76 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 C2orf74A8MZ97 194 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 FAM220BPB1ANY3 271 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 TLR4O00206 839 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 PCDHGA12O60330 932 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 DOK2O60496 412 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 OR2B3O76000 313 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 SRFP11831 508 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 GPX2P18283 190 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 PSMA3P25788 255 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 ENTPD1P49961 510 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 MRPS21P82921 87 aaKnown RBP9.65□□□□□ -0.86
RFFL-212ENST00000584655 SNAPC1Q16533 368 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 INTS11Q5TA45 600 aaKnown RBP9.65□□□□□ -0.86
RFFL-212ENST00000584655 ZNF605Q86T29 641 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 KRT73Q86Y46 540 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 MARCH9Q86YJ5 346 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 LAS2Q8IYD9 372 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 ZNF321PQ8N8H1 164 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 RORBQ92753 470 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 PLEKHA8Q96JA3 519 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 CCDC115Q96NT0 180 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 MBOAT4Q96T53 435 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 ZNF717Q9BY31 904 aaPredicted RBP9.65□□□□□ -0.86
RFFL-212ENST00000584655 TM9SF3Q9HD45 589 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 C1GALT1Q9NS00 363 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 GTF2A1LQ9UNN4 478 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 CSNK1G3Q9Y6M4 447 aa9.65□□□□□ -0.86
RFFL-212ENST00000584655 CDC40O60508 579 aaKnown RBP eCLIP9.65□□□□□ -0.87
RFFL-212ENST00000584655 ATE1O95260 518 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 MED26O95402 600 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 DNAJA1P31689 397 aaKnown RBP9.65□□□□□ -0.87
RFFL-212ENST00000584655 CLK3P49761 638 aaKnown RBP9.65□□□□□ -0.87
RFFL-212ENST00000584655 KCNJ10P78508 379 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 REEP5Q00765 189 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 NPRL3Q12980 569 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 GRIK2Q13002 908 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 DCTN2Q13561 401 aaKnown RBP9.65□□□□□ -0.87
RFFL-212ENST00000584655 SUZ12Q15022 739 aaKnown RBP9.65□□□□□ -0.87
RFFL-212ENST00000584655 DPY19L1Q2PZI1 675 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 C6orf141Q5SZD1 244 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms