RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 OR13C3Q8NGS6 347 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 SNAPC3Q92966 411 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 SYT3Q9BQG1 590 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 PCDHGA8Q9Y5G5 932 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 OR6C74A6NCV1 312 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 CSF1P09603 554 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 TYRP14679 529 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 PTNP21246 168 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 CERS1P27544 350 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 TAS2R31P59538 309 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 ERVPABLB-1P60509 514 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 C11orf84Q9BUA3 381 aaPredicted RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 KCNK13Q9HB14 408 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 ZNF334Q9HCZ1 680 aaPredicted RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 TRIM64A6NGJ6 449 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 C11orf98E9PRG8 122 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 UGT2B7P16662 529 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 CBLP22681 906 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 GPR4P46093 362 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 SLC26A5P58743 744 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 ZNF648Q5T619 568 aaPredicted RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 C7orf61Q8IZ16 206 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 HUS1BQ8NHY5 278 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 WDR20Q8TBZ3 569 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 GORASP2Q9H8Y8 452 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 PRTFDC1Q9NRG1 225 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 CDK1P06493 297 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 PCGF2P35227 344 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 OC90Q02509 493 aaPredicted RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 RGNQ15493 299 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 AMZ1Q400G9 498 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 CPZQ66K79 652 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 OTOP2Q7RTS6 562 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 TMEM156Q8N614 296 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
RNF43-208ENST00000584437 SORT1Q99523 831 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 DHRS4Q9BTZ2 278 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 APMAPQ9HDC9 416 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 NOX1Q9Y5S8 564 aa12.43□□□□□ -0.42
RNF43-208ENST00000584437 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ZNF850A8MQ14 1090 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ARNTLO00327 626 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 VEGFDO43915 354 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 MAS1P04201 325 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ZNF84P51523 738 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ZNF805Q5CZA5 627 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 PLBD1Q6P4A8 553 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 LRFN4Q6PJG9 635 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 ARHGAP12Q8IWW6 846 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 FAM217AQ8IXS0 508 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 CLECL1Q8IZS7 167 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 RHOXF1Q8NHV9 184 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 TBC1D15Q8TC07 691 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 HOXB13Q92826 284 aaPredicted RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 KLHL15Q96M94 604 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 GSTO2Q9H4Y5 243 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 RDH14Q9HBH5 336 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 CD300AQ9UGN4 299 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 BTNL2Q9UIR0 455 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ACOT7O00154 380 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 TAS2R38P59533 333 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 NKX3-2P78367 333 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 HYAL2Q12891 473 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 GPR19Q15760 415 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 C3P1Q6ZMU1 363 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ZNF461Q8TAF7 563 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 PTERQ96BW5 349 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 CDC6Q99741 560 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 MFFQ9GZY8 342 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 CLDN24A6NM45 220 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 UBFD1O14562 309 aaKnown RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 SPDEFO95238 335 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 GPX3P22352 226 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 EIF2DP41214 584 aaKnown RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 RPS5P46782 204 aaKnown RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 ID2Q02363 134 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 TBCEQ15813 527 aaPredicted RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 PAGE3Q5JUK9 113 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 CGB2Q6NT52 195 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 KCTD20Q7Z5Y7 419 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 FAM109AQ8N4B1 249 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 OR5H2Q8NGV7 314 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 RBCK1Q9BYM8 510 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 OR8D2Q9GZM6 311 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 FBXL12Q9NXK8 326 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 HCRTR2O43614 444 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 TGM6O95932 706 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 GALTP07902 379 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 HMGCLP35914 325 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ARSDP51689 593 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 PCGF3Q3KNV8 242 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms