RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 BCKDKO14874 412 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 RGS14O43566 566 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 CRCPO75575 148 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 PPM1BO75688 479 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 CHEK2O96017 543 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 ABCB1P08183 1280 aaPredicted RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 HOXD4P09016 255 aaPredicted RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 ESRRAP11474 423 aaPredicted RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 ALDH3A1P30838 453 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 PIGAP37287 484 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 RFC3P40938 356 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 ETV4P43268 484 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 MAGEA5P43359 124 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 DNASE1L1P49184 302 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 HSF1Q00613 529 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 DUSP8Q13202 625 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 SLC10A1Q14973 349 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 ERCC6LQ2NKX8 1250 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 UGT3A2Q3SY77 523 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 TRMT12Q53H54 448 aaKnown RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 TNFAIP8L3Q5GJ75 292 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 SPDYAQ5MJ70 313 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 FAM219BQ5XKK7 198 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 KANK2Q63ZY3 851 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 TMEM211Q6ICI0 200 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 FAM111BQ6SJ93 734 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 SCIMPQ6UWF3 145 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 Q6ZSR9 355 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 TRILQ7L0X0 811 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 NUP54Q7Z3B4 507 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 MRGPRGQ86SM5 289 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 CROCCP2Q86T23 111 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 CCDC116Q8IYX3 515 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 FAM13CQ8NE31 585 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 SPPL2AQ8TCT8 520 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 TCP10LQ8TDR4 215 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 DOK4Q8TEW6 326 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 SREK1Q8WXA9 508 aaKnown RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 TMEM41AQ96HV5 264 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 FAM111AQ96PZ2 611 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 CCT7Q99832 543 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 NXF5Q9H1B4 397 aaKnown RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 ZNF703Q9H7S9 590 aaPredicted RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 EML4Q9HC35 981 aaKnown RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 CHST11Q9NPF2 352 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 C1orf109Q9NX04 203 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 DTX4Q9Y2E6 619 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 GPR55Q9Y2T6 319 aaPredicted RBP9.09□□□□□ -0.95
SKA2-208ENST00000583927 DNAJC15Q9Y5T4 150 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 CSMD2Q7Z408 3487 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 FBN2P35556 2912 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 OR6C70A6NIJ9 312 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 LRRC3CA6NJW4 275 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 LSM1O15116 133 aaKnown RBP9.08□□□□□ -0.96
SKA2-208ENST00000583927 CDC40O60508 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
SKA2-208ENST00000583927 SNUPNO95149 360 aaKnown RBP9.08□□□□□ -0.96
SKA2-208ENST00000583927 CT45A8P0DMV1 189 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 CT45A9P0DMV2 189 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 PCSK2P16519 638 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 DCTP40126 519 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 CASP3P42574 277 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 KCNJ2P63252 427 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 BTKQ06187 659 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 C2orf80Q0P641 193 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 EXOSC7Q15024 291 aaKnown RBP9.08□□□□□ -0.96
SKA2-208ENST00000583927 ZNF630Q2M218 657 aaPredicted RBP9.08□□□□□ -0.96
SKA2-208ENST00000583927 CT45A2Q5DJT8 189 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 EMC4Q5J8M3 183 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 TMEM198Q66K66 360 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 CLEC6AQ6EIG7 209 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 CD163Q86VB7 1156 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 FAM9CQ8IZT9 166 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 CLYBLQ8N0X4 340 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 ADCY4Q8NFM4 1077 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 OR52R1Q8NGF1 315 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 RNF138Q8WVD3 245 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 DIO2Q92813 273 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 EXOSC8Q96B26 276 aaKnown RBP9.08□□□□□ -0.96
SKA2-208ENST00000583927 SARAFQ96BY9 339 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 PKNOX2Q96KN3 472 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 ZNF597Q96LX8 424 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 VSTM2LQ96N03 204 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 DOHHQ9BU89 302 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 ITPAQ9BY32 194 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 DEFB127Q9H1M4 99 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 UBQLN3Q9H347 655 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 TUBB1Q9H4B7 451 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 TAS2R9Q9NYW1 312 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 SLC17A7Q9P2U7 560 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 B4GALT7Q9UBV7 327 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 BCAP29Q9UHQ4 241 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 EXO1Q9UQ84 846 aaKnown RBP9.08□□□□□ -0.96
SKA2-208ENST00000583927 ACTL7BQ9Y614 415 aa9.08□□□□□ -0.96
SKA2-208ENST00000583927 CREBBPQ92793 2442 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 TRGV5A0A0B4J1U4 118 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 TTC36A6NLP5 189 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 FIGNL2A6NMB9 653 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 FAM166BA8MTA8 275 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 G3V3Y1 287 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms