RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 PIF1Q9H611 641 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 A4GALTQ9NPC4 353 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 C8orf4Q9NR00 106 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 AGPAT4Q9NRZ5 378 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 RPS6KA6Q9UK32 745 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 FAF1Q9UNN5 650 aaPredicted RBP11.18□□□□□ -0.62
GGA3-217ENST00000583667 SAMD4AQ9UPU9 718 aaKnown RBP11.18□□□□□ -0.62
GGA3-217ENST00000583667 RP1P56715 2156 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 RP1L1Q8IWN7 2480 aaPredicted RBP11.18□□□□□ -0.62
GGA3-217ENST00000583667 CROCCQ5TZA2 2017 aa11.18□□□□□ -0.62
GGA3-217ENST00000583667 AKAP9Q99996 3911 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 A0A087WV62 115 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 WASHC1A8K0Z3 465 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 TMX2-CTNND1H3BSU7 103 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 EMC8O43402 210 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 ASNA1O43681 348 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 DPM1O60762 260 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 B4GALT2O60909 372 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 DNAJB6O75190 326 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 SOX30O94993 753 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 ATP1B1P05026 303 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 FHP07954 510 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 RNH1P13489 461 aaKnown RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 PRF1P14222 555 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 PORP16435 677 aaPredicted RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 ERFP50548 548 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 ANXA11P50995 505 aaKnown RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 XKP51811 444 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 NCBP2P52298 156 aaKnown RBP eCLIP11.17□□□□□ -0.62
GGA3-217ENST00000583667 PCBP3P57721 371 aaKnown RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 IGLV3-21P80748 117 aaPredicted RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 CHRNB3Q05901 458 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 ATP6AP1Q15904 470 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 FAM98BQ52LJ0 330 aaKnown RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 CRB2Q5IJ48 1285 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.17□□□□□ -0.62
GGA3-217ENST00000583667 GCNT6Q5T4J0 391 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 PRAMEF8Q5VWM4 474 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 PRAMEF7Q5VXH5 474 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 AP1ARQ63HQ0 302 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 CBLL1Q75N03 491 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 EIF3MQ7L2H7 374 aaKnown RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 RNF130Q86XS8 419 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 ZNF595Q8IYB9 648 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 CCDC116Q8IYX3 515 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 LRRC25Q8N386 305 aaPredicted RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 OR56A1Q8NGH5 318 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 TBC1D20Q96BZ9 403 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 CENPNQ96H22 339 aaPredicted RBP11.17□□□□□ -0.62
GGA3-217ENST00000583667 CHID1Q9BWS9 393 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 KLHL4Q9C0H6 718 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 SYNDIG1Q9H7V2 258 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 C3orf14Q9HBI5 128 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 C5AR2Q9P296 337 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 PTGFRNQ9P2B2 879 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 CDC14AQ9UNH5 594 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 CSMD2Q7Z408 3487 aa11.17□□□□□ -0.62
GGA3-217ENST00000583667 GLOD5A6NK44 160 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 C9orf172C9J069 976 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 CHST10O43529 356 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 CTNSO60931 367 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 GCM2O75603 506 aaPredicted RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 ERAL1O75616 437 aaKnown RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 PRKD3O94806 890 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 CTSBP07858 339 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 TFPTP0C1Z6 253 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 SLC35E2P0CK97 266 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 ETFAP13804 333 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 CPMP14384 443 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 GALNSP34059 522 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 ETV5P41161 510 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 CRATP43155 626 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 MAGEA2P43356 314 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 AVPR1BP47901 424 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 PRIM2P49643 509 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 MAPK10P53779 464 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 ARSFP54793 590 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 DSTNP60981 165 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 PRR5P85299 388 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 CDK6Q00534 326 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 DUSP2Q05923 314 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 HSPB3Q12988 150 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 COX20Q5RI15 118 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 EXOSC6Q5RKV6 272 aaKnown RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 PRSS41Q7RTY9 318 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 PIWIL3Q7Z3Z3 882 aaKnown RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 CLEC4FQ8N1N0 589 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 PACRGLQ8N7B6 248 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 Q8N9G6 341 aaPredicted RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 TTC29Q8NA56 475 aaPredicted RBP11.16□□□□□ -0.62
GGA3-217ENST00000583667 TEX19Q8NA77 164 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 OR9A4Q8NGU2 314 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 ZNF675Q8TD23 568 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 LRTOMTQ8WZ04 291 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
GGA3-217ENST00000583667 SPRTNQ9H040 489 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms