RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 SERPINA11Q86U17 422 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 HIPK1Q86Z02 1210 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 MSRB3Q8IXL7 192 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 C8orf59Q8N0T1 100 aaPredicted RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 ZCCHC7Q8N3Z6 543 aaKnown RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 LIX1Q8N485 282 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 CLDN19Q8N6F1 224 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 ZNF555Q8NEP9 628 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 FAM110BQ8TC76 370 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 MAGEE2Q8TD90 523 aaPredicted RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 MCOLN3Q8TDD5 553 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 NRGNQ92686 78 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 ZNF566Q969W8 418 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 NUS1Q96E22 293 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 SLC47A1Q96FL8 570 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 CCDC120Q96HB5 630 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 HIST1H2AHQ96KK5 128 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 OR2M4Q96R27 311 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 OR52E6Q96RD3 313 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 SEPHS2Q99611 448 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 HIST1H2AJQ99878 128 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 H2AFJQ9BTM1 129 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 THUMPD3Q9BV44 507 aaKnown RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 ACPTQ9BZG2 426 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 CHST8Q9H2A9 424 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 ACTR8Q9H981 624 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 CXorf21Q9HAI6 301 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 PLGRKTQ9HBL7 147 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 PALMDQ9NP74 551 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 SERHLQ9NQF3 203 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 PHPT1Q9NRX4 125 aaPredicted RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 SEMA3GQ9NS98 782 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 DNAJC11Q9NVH1 559 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 FAM120CQ9NX05 1096 aaKnown RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 ARL15Q9NXU5 204 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 SLC25A37Q9NYZ2 338 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 CRIM1Q9NZV1 1036 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 B4GALT6Q9UBX8 382 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 ADGRE2Q9UHX3 823 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 CD84Q9UIB8 345 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 C3orf18Q9UK00 162 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 SAMD4AQ9UPU9 718 aaKnown RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 PDE10AQ9Y233 779 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 KCNK6Q9Y257 313 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 FARSAQ9Y285 508 aaKnown RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 SLC17A4Q9Y2C5 497 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 NAALAD2Q9Y3Q0 740 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 PCDHGB6Q9Y5F9 930 aa6.96□□□□□ -1.3
NF1-222ENST00000582892 KLF2Q9Y5W3 355 aaPredicted RBP6.96□□□□□ -1.3
NF1-222ENST00000582892 INTS1Q8N201 2190 aaKnown RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 EVPLLA8MZ36 301 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 G3V2T6 193 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 FFAR3O14843 346 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 GPR42O15529 346 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 NOL3O60936 208 aaKnown RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 SEC14L2O76054 403 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 SLCO2B1O94956 709 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CCNDBP1O95273 360 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 SNAP29O95721 258 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CST1P01037 141 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 FTH1P02794 183 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 ABCB1P08183 1280 aaPredicted RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 GSTM1P09488 218 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CCDC159P0C7I6 412 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 ATP1B2P14415 290 aaPredicted RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 LHCGRP22888 699 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 PPIBP23284 216 aaKnown RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 PCSK6P29122 969 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 VIPR1P32241 457 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CCR7P32248 378 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 HNF4AP41235 474 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 ASMTP46597 345 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 SPINT3P49223 89 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 RAD23AP54725 363 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CXCR4P61073 352 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 PTGR1Q14914 329 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 ATP13A5Q4VNC0 1218 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 LRRC23Q53EV4 343 aaPredicted RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 PYCR3Q53H96 274 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 SPANXN4Q5MJ08 99 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 FAM219BQ5XKK7 198 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 FRG2Q64ET8 278 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 LRRC66Q68CR7 880 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 RAET1GQ6H3X3 334 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 SUSD1Q6UWL2 747 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 Q6ZS92 163 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 HSD11B1LQ7Z5J1 315 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CAMKMTQ7Z624 323 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 MRGPRGQ86SM5 289 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 STK32CQ86UX6 486 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 PPP1R3BQ86XI6 285 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 CLVS1Q8IUQ0 354 aaPredicted RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 TRAM1L1Q8N609 369 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 PAF1Q8N7H5 531 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 FBXO15Q8NCQ5 510 aaPredicted RBP6.95□□□□□ -1.3
NF1-222ENST00000582892 SETD9Q8NE22 299 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 DDHD1Q8NEL9 900 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 OR8J2Q8NGG1 315 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 OR13F1Q8NGS4 319 aa6.95□□□□□ -1.3
NF1-222ENST00000582892 OR10A6Q8NH74 314 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms