RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 C1orf52Q8N6N3 182 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 C9orf106Q8NAJ2 232 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 OR52R1Q8NGF1 315 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 SELENOMQ8WWX9 145 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 NINJ1Q92982 152 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 HGDQ93099 445 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TM4SF18Q96CE8 201 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 LRRC46Q96FV0 321 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TMEM41AQ96HV5 264 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 SECISBP2Q96T21 854 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 PAFAH2Q99487 392 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 FOXC2Q99958 501 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TMUB1Q9BVT8 246 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 OSBPL11Q9BXB4 747 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CDC42EP4Q9H3Q1 356 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 SERHLQ9NQF3 203 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 PFDN4Q9NQP4 134 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 KLRF1Q9NZS2 232 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CES1P1Q9UKY3 287 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 IKBKGQ9Y6K9 419 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ITPR3Q14573 2671 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MTORP42345 2549 aa10.61□□□□□ -0.71
CDK5RAP3-223ENST00000582114 HRNRQ86YZ3 2850 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 NF1P21359 2839 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 C1orf226A1L170 272 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TUBAL3A6NHL2 446 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 GOLGA6L10A6NI86 522 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TRIM49D1C9J1S8 452 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 SNPHO15079 494 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ICOSLGO75144 302 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 UGT2B11O75310 529 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ESRRBO95718 433 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CBX7O95931 251 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 RPS17P08708 135 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 KLK2P20151 261 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 DNASE1P24855 282 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CTSSP25774 331 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 PTGDSP41222 190 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MAGEA12P43365 314 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 SLCO1A2P46721 670 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 DGKQP52824 942 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 PPP2R2AP63151 447 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 LUZP2Q86TE4 346 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CHDHQ8NE62 594 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 C17orf47Q8NEP4 570 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 OR14L1PQ8NHC6 308 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TRPC4APQ8TEL6 797 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 FAM222BQ8WU58 562 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 IFT81Q8WYA0 676 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 LCORQ96JN0 433 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CXXC4Q9H2H0 198 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ZNF629Q9UEG4 869 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MPDZO75970 2070 aa10.6□□□□□ -0.71
CDK5RAP3-223ENST00000582114 FAM221AA4D161 298 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 PRAMEF25A6NGN4 478 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CD8B2A6NJW9 211 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 A8MT66 165 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 H0Y3Z8 333 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 GUCY1B2O75343 617 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 OR4F21O95013 312 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 OTCP00480 354 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ATP1B1P05026 303 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 SBK3P0C264 359 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TMIGD3P0DMS9 266 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CYP4B1P13584 511 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CHN1P15882 459 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CSNK2A2P19784 350 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 STARP49675 285 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MAP4K2Q12851 820 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 FOXF2Q12947 444 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 RCAN2Q14206 197 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 POU4F3Q15319 338 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 FBXL19-AS1Q494R0 122 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 GGTA1PQ4G0N0 100 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 NHSL2Q5HYW2 709 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 OR5M10Q6IEU7 315 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TAOK1Q7L7X3 1001 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 NUP54Q7Z3B4 507 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CCDC116Q8IYX3 515 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CDYL2Q8N8U2 506 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ZNF483Q8TF39 744 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 KAT2AQ92830 837 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TMBIM1Q969X1 311 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ISL2Q96A47 359 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 EXOSC8Q96B26 276 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 CNRIP1Q96F85 164 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MRPL57Q9BQC6 102 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 TUBA1CQ9BQE3 449 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 MRPL46Q9H2W6 279 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 HEY2Q9UBP5 337 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ZNF639Q9UID6 485 aa10.59□□□□□ -0.71
CDK5RAP3-223ENST00000582114 ZNF225Q9UK10 706 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms