RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KLHL28Q9NXS3 571 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 USE1Q9NZ43 259 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 KCMF1Q9P0J7 381 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ENOPH1Q9UHY7 261 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ZNF639Q9UID6 485 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 SLC9A8Q9Y2E8 581 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 PADI2Q9Y2J8 665 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 CACNA1BQ00975 2339 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 MDC1Q14676 2089 aaKnown RBP8.72□□□□□ -1.01
SS18-220ENST00000582092 RP1P56715 2156 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 MAP1BP46821 2468 aaKnown RBP8.72□□□□□ -1.01
SS18-220ENST00000582092 UNC13CQ8NB66 2214 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ASXL3Q9C0F0 2248 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 A0A0A6YYC8 382 aaPredicted RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 CPED1A4D0V7 1026 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 WASHC1A8K0Z3 465 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 A8MU76 341 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 I3L1I5 382 aaPredicted RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 DPM1O60762 260 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 COQ9O75208 318 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 RDH16O75452 317 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 OR2B3O76000 313 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 DIRAS1O95057 198 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 GADD45GO95257 159 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 SNAP29O95721 258 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 CLPTM1O96005 669 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 C1QCP02747 245 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ALPPP05187 535 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 HMGN2P05204 90 aaKnown RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 ALOX5P09917 674 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 TFPTP0C1Z6 253 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 C1QTNF9P0C862 333 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 CKMT1AP12532 417 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ETS2P15036 469 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 RHCEP18577 417 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 TNNI3P19429 210 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ALAS2P22557 587 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 PRKACGP22612 351 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 MYF6P23409 242 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 IGFBP5P24593 272 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 OR1E2P47887 323 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 SEPHS1P49903 392 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 RPS6KA3P51812 740 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ITGA1P56199 1179 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ID2Q02363 134 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 BIKQ13323 160 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 FAM53BQ14153 422 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 GK3PQ14409 553 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ZNHIT3Q15649 155 aaPredicted RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 GPR19Q15760 415 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 NKG7Q16617 165 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 SLC36A3Q495N2 470 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 NHSL2Q5HYW2 709 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 RPS26P11Q5JNZ5 115 aaPredicted RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 PRAMEF8Q5VWM4 474 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 PRAMEF7Q5VXH5 474 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 UGT2A3Q6UWM9 527 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 C17orf82Q86X59 251 aaPredicted RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 EPHX4Q8IUS5 362 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ZNF595Q8IYB9 648 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 CACTIN-AS1Q8N1I8 211 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 KDF1Q8NAX2 398 aaPredicted RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 SETD9Q8NE22 299 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 SUN3Q8TAQ9 357 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 PHF10Q8WUB8 498 aaKnown RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 ZCCHC14Q8WYQ9 949 aaKnown RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 TAMM41Q96BW9 452 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 DGAT2Q96PD7 388 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 MS4A4EQ96PG1 132 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 OR7D2Q96RA2 312 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 NDC1Q9BTX1 674 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 YTHDF1Q9BYJ9 559 aaKnown RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 MRPS26Q9BYN8 205 aaKnown RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 ANKRD60Q9BZ19 345 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.02
SS18-220ENST00000582092 ARMC7Q9H6L4 198 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 SYNDIG1Q9H7V2 258 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 SMURF2Q9HAU4 748 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 PRTFDC1Q9NRG1 225 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 KRT84Q9NSB2 600 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 GPATCH2Q9NW75 528 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ABCG2Q9UNQ0 655 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 TESMINQ9Y4I5 508 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ENPP4Q9Y6X5 453 aa8.71□□□□□ -1.02
SS18-220ENST00000582092 ACACAQ13085 2346 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 SCN3AQ9NY46 2000 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 IGHV1OR21-1A0A087WYE8 117 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 TMEM150CB9EJG8 249 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 FAM227AF5H4B4 570 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 PLOD2O00469 737 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 ASNA1O43681 348 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 KIF1CO43896 1103 aaKnown RBP8.7□□□□□ -1.02
SS18-220ENST00000582092 B4GALT2O60909 372 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 LDB3O75112 727 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 NSA2O95478 260 aaKnown RBP8.7□□□□□ -1.02
SS18-220ENST00000582092 IFNA16P05015 189 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 ALPLP05186 524 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 FESP07332 822 aa8.7□□□□□ -1.02
SS18-220ENST00000582092 SLC35E2P0CK97 266 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms