RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SLCO4A1Q96BD0 722 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 FAM122AQ96E09 287 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 JAKMIP1Q96N16 626 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 CPXM1Q96SM3 734 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 KIR2DL4Q99706 377 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 ISG20L2Q9H9L3 353 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 ACOXLQ9NUZ1 547 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 SLC2A6Q9UGQ3 507 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 TNRQ92752 1358 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 EI24O14681 340 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 SLC7A4O43246 635 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 NUDT21O43809 227 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 TYROBPO43914 113 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 LCMT2O60294 686 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 RANBP6O60518 1105 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 SFTPBP07988 381 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 OR1D4P47884 311 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF133P52736 654 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 NME5P56597 212 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 STX1BP61266 288 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 RPS8P62241 208 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 GPAT3Q53EU6 434 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 PRSS42Q7Z5A4 293 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 GDAP1Q8TB36 358 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 RNASE8Q8TDE3 154 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 RAB39BQ96DA2 213 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 CFAP36Q96G28 342 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 ELOVL4Q9GZR5 314 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 TSPYL1Q9H0U9 437 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 TSPY26PQ9H489 355 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 AKIRIN1Q9H9L7 192 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 ZCCHC3Q9NUD5 404 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 VPS54Q9P1Q0 977 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 DPM3Q9P2X0 92 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 ERVK-18Q9QC07 812 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 TRPC4Q9UBN4 977 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 APOBEC3BQ9UH17 382 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 CCPG1Q9ULG6 757 aa2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNFX1Q9P2E3 1918 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-206ENST00000581631 IGLV8-61A0A075B6I0 122 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 FAM231BA6NCW3 169 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 C5orf51A6NDU8 294 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 MFSD2BA6NFX1 497 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 SLC28A1O00337 649 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 SLC17A2O00624 439 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF263O14978 683 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 TGDSO95455 350 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 IGKV3-11P04433 115 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 HSPB1P04792 205 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 IGFBP5P24593 272 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 MAT2AP31153 395 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ALDH3B2P48448 385 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 POU3F4P49335 361 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 RAG2P55895 527 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ROR1Q01973 937 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 NPRL3Q12980 569 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ZIC1Q15915 447 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 SHROOM1Q2M3G4 852 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 FUT11Q495W5 492 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 GLYR1Q49A26 553 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 PAGE2BQ5JRK9 111 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 C11orf88Q6PI97 169 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 TMEM270Q6UE05 265 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ERICH1Q86X53 443 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 PYROXD2Q8N2H3 581 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 C14orf178Q8N769 122 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 OR52J3Q8NH60 311 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 LHX4Q969G2 390 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF799Q96GE5 643 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 C16orf74Q96GX8 76 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 TECTBQ96PL2 329 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 ACCSQ96QU6 501 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 APOOQ9BUR5 198 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 NMUR2Q9GZQ4 415 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 MMADHCQ9H3L0 296 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 MYOZ2Q9NPC6 264 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 NARFQ9UHQ1 456 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 FBXW2Q9UKT8 454 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 STX8Q9UNK0 236 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 CA5BQ9Y2D0 317 aa2.15□□□□□ -2.07
SMCHD1-206ENST00000581631 SYNJ2O15056 1496 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 PANO1I0J062 215 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 EEF2KO00418 725 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 SERF1AO75920 110 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 AKAP3O75969 853 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 PROS1P07225 676 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 CCDC166P0CW27 439 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 GHRP10912 638 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 FERP16591 822 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 UGT1A6P19224 532 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 FCARP24071 287 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 TNNT3P45378 269 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 OR3A4PP47883 348 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 NT5C2P49902 561 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 WNT4P56705 351 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 SLMAPQ14BN4 828 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 SGCBQ16585 318 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 AARDQ4LEZ3 155 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 GLRA4Q5JXX5 417 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms