RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZNF385BQ569K4 471 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PAGE3Q5JUK9 113 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 OR4F3Q6IEY1 312 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 SLC2A7Q6PXP3 512 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 DLEU7Q6UYE1 221 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 RNF111Q6ZNA4 994 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 DHDDSQ86SQ9 333 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 LGI4Q8N135 537 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 KIF2BQ8N4N8 673 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 SIRT6Q8N6T7 355 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 OR7G1Q8NGA0 311 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 OR8J3Q8NGG0 315 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 OR9A2Q8NGT5 310 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 OR8K3Q8NH51 312 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PSMA8Q8TAA3 256 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 ZNF721Q8TF20 911 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PSMF1Q92530 271 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 MCUR1Q96AQ8 359 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 AMDHD1Q96NU7 426 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 UBL7Q96S82 380 aaPredicted RBP14.42□□□□□ -0.1
SS18-216ENST00000580751 NUDT9Q9BW91 350 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 ZNF552Q9H707 407 aaPredicted RBP14.42□□□□□ -0.1
SS18-216ENST00000580751 SERHLQ9NQF3 203 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 MAT2BQ9NZL9 334 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PTGFRNQ9P2B2 879 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 A0A1W2PRB8 838 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 OR6C76A6NM76 312 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 A8MUI8 341 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 C9JVG2 144 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ZFAND5O76080 213 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 SOX11P35716 441 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 PSME3P61289 254 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 SLC25A3Q00325 362 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 LTB4RQ15722 352 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ZNF628Q5EBL2 1059 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 C6orf10Q5SRN2 563 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 TCTN3Q6NUS6 607 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 H3F3CQ6NXT2 135 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ISLR2Q6UXK2 745 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 HPS6Q86YV9 775 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 DEFB107AQ8IZN7 70 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ADCY4Q8NFM4 1077 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 OR5L2Q8NGL0 311 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 C9orf43Q8TAL5 461 aaPredicted RBP14.41□□□□□ -0.1
SS18-216ENST00000580751 TM9SF4Q92544 642 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 CIDECQ96AQ7 238 aaPredicted RBP14.41□□□□□ -0.1
SS18-216ENST00000580751 CTHRC1Q96CG8 243 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ABHD17AQ96GS6 310 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ZNF354BQ96LW1 612 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 PANX1Q96RD7 426 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 CGREF1Q99674 301 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 SMAD5Q99717 465 aaKnown RBP14.41□□□□□ -0.1
SS18-216ENST00000580751 GLIPR2Q9H4G4 154 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 EPS8L2Q9H6S3 715 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 SLAMF7Q9NQ25 335 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 TAS2R9Q9NYW1 312 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ABI3Q9P2A4 366 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ZNF223Q9UK11 482 aaPredicted RBP14.41□□□□□ -0.1
SS18-216ENST00000580751 CORO2BQ9UQ03 480 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 ZNF451Q9Y4E5 1061 aa14.41□□□□□ -0.1
SS18-216ENST00000580751 CNTRLQ7Z7A1 2325 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 TRBV5-3A0A0A0MS03 114 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 FXYD1O00168 92 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 HRKO00198 91 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 PLOD3O60568 738 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 PRAMEF2O60811 474 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 BCAS2O75934 225 aaPredicted RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 CT62P0C5K7 136 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 SSTR4P31391 388 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 PTGER1P34995 402 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 GPC1P35052 558 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 PGM1P36871 562 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 MANFP55145 182 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 SLC37A1P57057 533 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 RNF4P78317 190 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 MRPS35P82673 323 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 TXNL4AP83876 142 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 MGAT2Q10469 447 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 HSPB3Q12988 150 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 MFAP5Q13361 173 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 MEP1AQ16819 746 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 MPEG1Q2M385 716 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 SAMD4BQ5PRF9 694 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 ACER2Q5QJU3 275 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 ABHD17BQ5VST6 288 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 FAM111BQ6SJ93 734 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 BNC2Q6ZN30 1099 aaPredicted RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 SLC29A4Q7RTT9 530 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 RPS19BP1Q86WX3 136 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 ARMC10Q8N2F6 343 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 AMER2Q8N7J2 671 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 ZNF321PQ8N8H1 164 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 NUBPLQ8TB37 319 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 MOAP1Q96BY2 351 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 ANKRD27Q96NW4 1050 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 CADM1Q9BY67 442 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 PAIP1Q9H074 479 aaKnown RBP14.4□□□□□ -0.1
SS18-216ENST00000580751 TMEM181Q9P2C4 612 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 ABCD2Q9UBJ2 740 aa14.4□□□□□ -0.1
SS18-216ENST00000580751 ZNF639Q9UID6 485 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms