RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PCDHB14Q9Y5E9 798 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 HEMK1Q9Y5R4 338 aaPredicted RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 CEP295Q9C0D2 2601 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 TMEM247A6NEH6 219 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 ARGFXA6NJG6 315 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 CLIC1O00299 241 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 FBP2O00757 339 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 CBX7O95931 251 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 HMGN2P05204 90 aaKnown RBP13.27□□□□□ -0.29
SKA2-205ENST00000580541 GSNP06396 782 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 ALOX5P09917 674 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 DRD5P21918 477 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 MATN1P21941 496 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 PPICP45877 212 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 SRSF6Q13247 344 aaKnown RBP13.27□□□□□ -0.29
SKA2-205ENST00000580541 EXOSC7Q15024 291 aaKnown RBP13.27□□□□□ -0.29
SKA2-205ENST00000580541 ATAD3BQ5T9A4 648 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 LGI4Q8N135 537 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 SLC15A4Q8N697 577 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 C16orf52Q8NHV5 167 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 ADAMTS15Q8TE58 950 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 RCN3Q96D15 328 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 THOC3Q96J01 351 aaKnown RBP13.27□□□□□ -0.29
SKA2-205ENST00000580541 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 CGREF1Q99674 301 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 NPAS2Q99743 824 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 THUMPD3Q9BV44 507 aaKnown RBP13.27□□□□□ -0.29
SKA2-205ENST00000580541 ARL8BQ9NVJ2 186 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 MAP10Q9P2G4 905 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 GMEB1Q9Y692 573 aa13.27□□□□□ -0.29
SKA2-205ENST00000580541 ASPDHA6ND91 283 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 A8MUI8 341 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 ACOX3O15254 700 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 ALPPP05187 535 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 CDKN2CP42773 168 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 EMDP50402 254 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 NUDT2P50583 147 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 PSMD4P55036 377 aaKnown RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 ZNF155Q12901 538 aaPredicted RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 CHAF1BQ13112 559 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 FADDQ13158 208 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 GNA13Q14344 377 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 MEP1AQ16819 746 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 AGAP7PQ5VUJ5 663 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 H3F3CQ6NXT2 135 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 CDC73Q6P1J9 531 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 C16orf89Q6UX73 402 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 DLEU7Q6UYE1 221 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 RETREG3Q86VR2 466 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 RPS19BP1Q86WX3 136 aaKnown RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 GALNT16Q8N428 558 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 OR8J3Q8NGG0 315 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 OR5AK3PQ8NH89 298 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 MIPOL1Q8TD10 442 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 DOK4Q8TEW6 326 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 ZFP90Q8TF47 636 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 SNRNP27Q8WVK2 155 aaKnown RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 HSPBAP1Q96EW2 488 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 LCORQ96JN0 433 aaPredicted RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 SLC35G5Q96KT7 338 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 ANKRD27Q96NW4 1050 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 AGAP4Q96P64 663 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 STACQ99469 402 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 IL1RL2Q9HB29 575 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 FOLH1BQ9HBA9 442 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 Q9N2J8 555 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 EXD2Q9NVH0 621 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 YARS2Q9Y2Z4 477 aaKnown RBP13.26□□□□□ -0.29
SKA2-205ENST00000580541 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 AKAP13Q12802 2813 aa13.26□□□□□ -0.29
SKA2-205ENST00000580541 B2RBV5 119 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 HRKO00198 91 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 TAF4O00268 1085 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 ASNA1O43681 348 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 PSMG1O95456 288 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 ITGB2P05107 769 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 ITPKBP27987 946 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 PTGER1P34995 402 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 KRT20P35900 424 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 KHKP50053 298 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 MRPS22P82650 360 aaKnown RBP13.25□□□□□ -0.29
SKA2-205ENST00000580541 LASP1Q14847 261 aaKnown RBP13.25□□□□□ -0.29
SKA2-205ENST00000580541 CYP27C1Q4G0S4 372 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 RUNDC3AQ59EK9 446 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 CRB2Q5IJ48 1285 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 ATP1A1-AS1Q5TC04 95 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 ABHD17BQ5VST6 288 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 MFSD12Q6NUT3 480 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 BORAQ6PGQ7 559 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 DNAJC14Q6Y2X3 702 aaPredicted RBP13.25□□□□□ -0.29
SKA2-205ENST00000580541 CCDC121Q6ZUS5 278 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 DND1Q8IYX4 353 aaKnown RBP13.25□□□□□ -0.29
SKA2-205ENST00000580541 OR52N2Q8NGI0 321 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 SLC9A6Q92581 669 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 JADE3Q92613 823 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 GAL3ST4Q96RP7 486 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms