RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 AUNIPQ9H7T9 357 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CLK4Q9HAZ1 481 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ELOVL3Q9HB03 270 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 KCNK13Q9HB14 408 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 LPAR2Q9HBW0 351 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ZFP14Q9HCL3 533 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM45AQ9NWC5 275 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ONECUT1Q9UBC0 465 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 WNT16Q9UBV4 365 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 LCMT1Q9UIC8 334 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TINAGQ9UJW2 476 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MRTO4Q9UKD2 239 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 PADI3Q9ULW8 664 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RPH3ALQ9UNE2 315 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 PIGLQ9Y2B2 252 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CA5BQ9Y2D0 317 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 IFT52Q9Y366 437 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 WDR45Q9Y484 360 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 PTPRCP08575 1304 aa2.84□□□□□ -1.96
KPNB1-208ENST00000580019 PHLPP2Q6ZVD8 1323 aa2.84□□□□□ -1.96
KPNB1-208ENST00000580019 CNTNAP1P78357 1384 aa2.84□□□□□ -1.96
KPNB1-208ENST00000580019 PXDNLA1KZ92 1463 aa2.84□□□□□ -1.96
KPNB1-208ENST00000580019 MKI67P46013 3256 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MYH14Q7Z406 1995 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 VCANP13611 3396 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CACNA1AO00555 2505 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PAPPAQ13219 1627 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CICQ96RK0 1608 aaPredicted RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PHRF1Q9P1Y6 1649 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 COL24A1Q17RW2 1714 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PEAK1Q9H792 1746 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TRBV5-3A0A0A0MS03 114 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PPIAL4CA0A0B4J2A2 164 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 LY6G6EA0A0G2JKS1 128 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ATP6AP2A0A1C7CYW4 349 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ERICH2A1L162 156 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 RNF222A6NCQ9 220 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 OR6C74A6NCV1 312 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 YJEFN3A6XGL0 299 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 E5RGE8 158 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 H3BTX0 84 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 J3KR12 359 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 K7ERQ8 282 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TRDMT1O14717 391 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 STX7O15400 261 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 DFNA5O60443 496 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 NDUFS7O75251 213 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 KRT36O76013 467 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TXNDC12O95881 172 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 OR8G3PP0DMU2 310 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PPIAL4GP0DN37 164 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 FCGR1AP12314 374 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 EZRP15311 586 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 UQCRC2P22695 453 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CPN2P22792 545 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 NKX2-1P43699 371 aaPredicted RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 STARP49675 285 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 RPS18P62269 152 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 RPS15P62841 145 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PPIAP62937 165 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PITX1P78337 314 aaPredicted RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CX3CL1P78423 397 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF415Q09FC8 603 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MERTKQ12866 999 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 BNIP1Q12981 228 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 DRP2Q13474 957 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 EXOSC2Q13868 293 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 OPCMLQ14982 345 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 EXOSC7Q15024 291 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 HERC3Q15034 1050 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ZSWIM7Q19AV6 140 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 AMZ1Q400G9 498 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TMEM35AQ53FP2 167 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CTSL3PQ5NE16 218 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 LIN9Q5TKA1 542 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 RTL6Q6ICC9 239 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CAPN13Q6MZZ7 669 aaPredicted RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 FAM122CQ6P4D5 195 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ERICH5Q6P6B1 374 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 EIF3MQ7L2H7 374 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 GPSM1Q86YR5 675 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TGIF2LXQ8IUE1 241 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CHERPQ8IWX8 916 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MMD2Q8IY49 270 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MLKLQ8NB16 471 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 SLC44A5Q8NCS7 719 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 OR2AK2Q8NG84 335 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 SPATA22Q8NHS9 363 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 KCNG3Q8TAE7 436 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 FGFBP3Q8TAT2 258 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TMEM174Q8WUU8 243 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MITD1Q8WV92 249 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 SUSD6Q92537 303 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 EME1Q96AY2 570 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PHF21AQ96BD5 680 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 COQ8BQ96D53 544 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 REPS1Q96D71 796 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 DEFB118Q96PH6 123 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ACCSQ96QU6 501 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MAP3K3Q99759 626 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms