RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 F8A1P23610 371 aa15.02■□□□□ -0
SS18-211ENST00000578954 SSTR4P31391 388 aa15.02■□□□□ -0
SS18-211ENST00000578954 KHKP50053 298 aa15.02■□□□□ -0
SS18-211ENST00000578954 EMDP50402 254 aa15.02■□□□□ -0
SS18-211ENST00000578954 ANXA11P50995 505 aaKnown RBP15.02■□□□□ -0
SS18-211ENST00000578954 PRKAG1P54619 331 aa15.02■□□□□ -0
SS18-211ENST00000578954 SLC37A1P57057 533 aa15.02■□□□□ -0
SS18-211ENST00000578954 DSTNP60981 165 aa15.02■□□□□ -0
SS18-211ENST00000578954 RBBP4Q09028 425 aa15.02■□□□□ -0
SS18-211ENST00000578954 SSPNQ14714 243 aa15.02■□□□□ -0
SS18-211ENST00000578954 EXOSC7Q15024 291 aaKnown RBP15.02■□□□□ -0
SS18-211ENST00000578954 PCOLCEQ15113 449 aa15.02■□□□□ -0
SS18-211ENST00000578954 ADRM1Q16186 407 aa15.02■□□□□ -0
SS18-211ENST00000578954 FAAH2Q6GMR7 532 aa15.02■□□□□ -0
SS18-211ENST00000578954 ERICH5Q6P6B1 374 aa15.02■□□□□ -0
SS18-211ENST00000578954 PAPD4Q6PIY7 484 aaKnown RBP15.02■□□□□ -0
SS18-211ENST00000578954 ZZZ3Q8IYH5 903 aa15.02■□□□□ -0
SS18-211ENST00000578954 RNF148Q8N7C7 305 aa15.02■□□□□ -0
SS18-211ENST00000578954 CDRT4Q8N9R6 151 aa15.02■□□□□ -0
SS18-211ENST00000578954 OR2T12Q8NG77 320 aa15.02■□□□□ -0
SS18-211ENST00000578954 OR1N1Q8NGS0 311 aa15.02■□□□□ -0
SS18-211ENST00000578954 DOK4Q8TEW6 326 aa15.02■□□□□ -0
SS18-211ENST00000578954 VSTM2LQ96N03 204 aa15.02■□□□□ -0
SS18-211ENST00000578954 LPAR4Q99677 370 aa15.02■□□□□ -0
SS18-211ENST00000578954 KCTD14Q9BQ13 255 aaPredicted RBP15.02■□□□□ -0
SS18-211ENST00000578954 MESP1Q9BRJ9 268 aa15.02■□□□□ -0
SS18-211ENST00000578954 LMF2Q9BU23 707 aaKnown RBP15.02■□□□□ -0
SS18-211ENST00000578954 CNPPD1Q9BV87 410 aa15.02■□□□□ -0
SS18-211ENST00000578954 SEMA4CQ9C0C4 833 aa15.02■□□□□ -0
SS18-211ENST00000578954 ZNF700Q9H0M5 742 aa15.02■□□□□ -0
SS18-211ENST00000578954 OR10A5Q9H207 317 aa15.02■□□□□ -0
SS18-211ENST00000578954 OR51I1Q9H343 314 aa15.02■□□□□ -0
SS18-211ENST00000578954 MUC13Q9H3R2 512 aa15.02■□□□□ -0
SS18-211ENST00000578954 KCND3Q9UK17 655 aa15.02■□□□□ -0
SS18-211ENST00000578954 HEMK1Q9Y5R4 338 aaPredicted RBP15.02■□□□□ -0
SS18-211ENST00000578954 SPTBN2O15020 2390 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 IGHV1-45A0A0A0MS14 117 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 OR6C76A6NM76 312 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 A8MUA0 341 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 HMGN4O00479 90 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 SOCS6O14544 535 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 SORBS2O94875 1100 aaKnown RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 SOX30O94993 753 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 NUDT7P0C024 238 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 ARAFP10398 606 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 COX6A1P12074 109 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 CRATP43155 626 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 PGDP52209 483 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 RPS18P62269 152 aaKnown RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 RPS26P62854 115 aaKnown RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 EEF1A2Q05639 463 aaKnown RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 TRIM25Q14258 630 aaKnown RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 TBC1D25Q3MII6 688 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 GCNT6Q5T4J0 391 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 FAM69BQ5VUD6 431 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 TNFAIP8L2Q6P589 184 aaPredicted RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 ANGPTL8Q6UXH0 198 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 SZRD1Q7Z422 152 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 PPP1R32Q7Z5V6 425 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 MICU2Q8IYU8 434 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 B3GNT7Q8NFL0 401 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 TNIP2Q8NFZ5 429 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 ASB9Q96DX5 294 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 C16orf58Q96GQ5 468 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 OR7D2Q96RA2 312 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 STACQ99469 402 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 FOLH1BQ9HBA9 442 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 A4GALTQ9NPC4 353 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 DUSP22Q9NRW4 184 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 PRODH2Q9UF12 536 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 FAF1Q9UNN5 650 aaPredicted RBP15.01□□□□□ -0.01
SS18-211ENST00000578954 USP22Q9UPT9 525 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 POMPQ9Y244 141 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 CFL2Q9Y281 166 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 AK5Q9Y6K8 562 aa15.01□□□□□ -0.01
SS18-211ENST00000578954 IGHV3-20A0A0C4DH32 117 aa15□□□□□ -0.01
SS18-211ENST00000578954 ELOVL7A1L3X0 281 aa15□□□□□ -0.01
SS18-211ENST00000578954 DUXAA6NLW8 204 aa15□□□□□ -0.01
SS18-211ENST00000578954 ACOT8O14734 319 aa15□□□□□ -0.01
SS18-211ENST00000578954 NKX2-2O95096 273 aa15□□□□□ -0.01
SS18-211ENST00000578954 AGR2O95994 175 aa15□□□□□ -0.01
SS18-211ENST00000578954 ACP2P11117 423 aa15□□□□□ -0.01
SS18-211ENST00000578954 PCGF2P35227 344 aa15□□□□□ -0.01
SS18-211ENST00000578954 TRAP1Q12931 704 aaKnown RBP15□□□□□ -0.01
SS18-211ENST00000578954 VEZF1Q14119 521 aa15□□□□□ -0.01
SS18-211ENST00000578954 CYP51A1Q16850 503 aa15□□□□□ -0.01
SS18-211ENST00000578954 ZNF630Q2M218 657 aaPredicted RBP15□□□□□ -0.01
SS18-211ENST00000578954 VMACQ2NL98 169 aa15□□□□□ -0.01
SS18-211ENST00000578954 KIRREL2Q6UWL6 708 aa15□□□□□ -0.01
SS18-211ENST00000578954 RNF111Q6ZNA4 994 aa15□□□□□ -0.01
SS18-211ENST00000578954 METTL25Q8N6Q8 603 aa15□□□□□ -0.01
SS18-211ENST00000578954 ZNF321PQ8N8H1 164 aa15□□□□□ -0.01
SS18-211ENST00000578954 APCDD1LQ8NCL9 501 aa15□□□□□ -0.01
SS18-211ENST00000578954 FAM156AQ8NDB6 213 aa15□□□□□ -0.01
SS18-211ENST00000578954 C16orf52Q8NHV5 167 aa15□□□□□ -0.01
SS18-211ENST00000578954 ADAMTS17Q8TE56 1095 aa15□□□□□ -0.01
SS18-211ENST00000578954 C8orf44Q96CB5 159 aa15□□□□□ -0.01
SS18-211ENST00000578954 IMMP1LQ96LU5 166 aa15□□□□□ -0.01
SS18-211ENST00000578954 NUDT9Q9BW91 350 aa15□□□□□ -0.01
SS18-211ENST00000578954 SCNM1Q9BWG6 230 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms