RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 RAB39BQ96DA2 213 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 TRIM44Q96DX7 344 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 CCDC51Q96ER9 411 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 PCED1BQ96HM7 432 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 DEFB118Q96PH6 123 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 TPPP3Q9BW30 176 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 PUS3Q9BZE2 481 aaKnown RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 RIBC2Q9H4K1 309 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 FAM124BQ9H5Z6 455 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 RPAP3Q9H6T3 665 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 DCTPP1Q9H773 170 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 NT5DC2Q9H857 520 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ACTR8Q9H981 624 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ROPN1Q9HAT0 212 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 AMBNQ9NP70 447 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 IL1RAPQ9NPH3 570 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CENPMQ9NSP4 180 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 THAP10Q9P2Z0 257 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 SEC14L4Q9UDX3 406 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CHRNA9Q9UGM1 479 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 LAMP5Q9UJQ1 280 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SNX6Q9UNH7 406 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 MGAT4BQ9UQ53 548 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CHMP2BQ9UQN3 213 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 NCAPD2Q15021 1401 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 TRBV5-4A0A0C4DH59 114 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 A0A1B0GTH9 108 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ANKRD30BLA7E2S9 258 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 FOXI3A8MTJ6 420 aaPredicted RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 GPR89AB7ZAQ6 455 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ANHXE9PGG2 379 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 F8WDY8 70 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 K7EQG2 157 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ZNF749O43361 778 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 GALR3O60755 368 aaPredicted RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 DUSP11O75319 330 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 HMMRO75330 724 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 VPS26AO75436 327 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 TBX6O95947 436 aaPredicted RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 CXCL10P02778 98 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 PCCBP05166 539 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 CA3P07451 260 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 GPR89BP0CG08 455 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 EPB41P11171 864 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 RALAP11233 206 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 GP9P14770 177 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 FOSL2P15408 326 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 GATA1P15976 413 aaPredicted RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 TSPAN8P19075 237 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 PSMA5P28066 241 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 TMOD1P28289 359 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 SOX6P35712 828 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 DLSTP36957 453 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ACAA2P42765 397 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 TNFRSF4P43489 277 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 CCL11P51671 97 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 LIMK2P53671 638 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 PPIAP62937 165 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 RPS27AP62979 156 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 MYBPC1Q00872 1141 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 BNIP1Q12981 228 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 PDZK1IP1Q13113 114 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 EXOSC7Q15024 291 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 SIX1Q15475 284 aaPredicted RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 CLPPQ16740 277 aaPredicted RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 ADPRMQ3LIE5 342 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 AGKQ53H12 422 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 C9orf66Q5T8R8 295 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ZNF343Q6P1L6 599 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 CES3Q6UWW8 571 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 BAIAP2L2Q6UXY1 529 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 STOX1Q6ZVD7 989 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 MOB2Q70IA6 237 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 CDC20BQ86Y33 519 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ZNF573Q86YE8 665 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 MISPQ8IVT2 679 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 LINC00518Q8N0U6 118 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 PARP8Q8N3A8 854 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 FGFRL1Q8N441 504 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 FAM71CQ8NEG0 241 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 OR56B1Q8NGI3 324 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 TFB1MQ8WVM0 346 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 NABP1Q96AH0 204 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 PINX1Q96BK5 328 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 C14orf79Q96F83 325 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 CAPNS2Q96L46 248 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 TSPAN18Q96SJ8 248 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 SOSTQ9BQB4 213 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ANP32EQ9BTT0 268 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 TMEM117Q9H0C3 514 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 ECT2Q9H8V3 914 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 Q9HAA7 133 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 VAT1LQ9HCJ6 419 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 POLD4Q9HCU8 107 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 TECRQ9NZ01 308 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 ATXN10Q9UBB4 475 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 BCAP29Q9UHQ4 241 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 XPO7Q9UIA9 1087 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.04□□□□□ -2.08
COPS3-213ENST00000577210 DUSP12Q9UNI6 340 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms