RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 FRA10AC1Q70Z53 315 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 FAM214BQ7L5A3 538 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 PEX26Q7Z412 305 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 PRUNE1Q86TP1 453 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 STK32CQ86UX6 486 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 SPNS2Q8IVW8 549 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 OR4N5Q8IXE1 308 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 PRR22Q8IZ63 422 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 C3orf56Q8N813 242 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 CEP112Q8N8E3 955 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 GBP7Q8N8V2 638 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 ACOT4Q8N9L9 421 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 C17orf47Q8NEP4 570 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 ELOA3Q8NG57 546 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 OR10H5Q8NGA6 315 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 OR6K3Q8NGY3 331 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 FAM168AQ92567 244 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TANKQ92844 425 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 RIT1Q92963 219 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 GFM2Q969S9 779 aaKnown RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 C11orf24Q96F05 449 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 TBCDQ9BTW9 1192 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TRAF4Q9BUZ4 470 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 PINK1Q9BXM7 581 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 CAPS2Q9BXY5 557 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 GRIP2Q9C0E4 1043 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 LACRTQ9GZZ8 138 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 STMN4Q9H169 189 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 RPF2Q9H7B2 306 aaKnown RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 NT5DC2Q9H857 520 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 RNF122Q9H9V4 155 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 LZTFL1Q9NQ48 299 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 SERHLQ9NQF3 203 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 C20orf96Q9NUD7 363 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 HEY2Q9UBP5 337 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 FBXO5Q9UKT4 447 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 GUCA1BQ9UMX6 200 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TFR2Q9UP52 801 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 EXO1Q9UQ84 846 aaKnown RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 GPR52Q9Y2T5 361 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 SAR1BQ9Y6B6 198 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 DSCAMO60469 2012 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 KIAA1549Q9HCM3 1950 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 TRRAPQ9Y4A5 3859 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 hCG_2014768A0A024R1R8 64 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 LOC100289279A0A1B0GTE1 492 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 TCRBV7S2A1N4TA0A589 114 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 MAGEB16A2A368 324 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PRAMEF25A6NGN4 478 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 SERINC4A6NH21 518 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 EFCAB8A8MWE9 144 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 SEC14L5O43304 696 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 ICOSLGO75144 302 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 TNFRSF21O75509 655 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PPM1BO75688 479 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 HAUS5O94927 633 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 SCELO95171 688 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 ZSCAN5DPP0CG00 497 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 NAGAP17050 411 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 USF1P22415 310 aaPredicted RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 ATP5A1P25705 553 aaKnown RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 ABCD3P28288 659 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 SSTR4P31391 388 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 GALNSP34059 522 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 GTF2A1P52655 376 aaPredicted RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 CTBP2P56545 445 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 RPS3AP61247 264 aaKnown RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 LSM11P83369 360 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMG6-219ENST00000575663 TNFRSF17Q02223 184 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 CKAP4Q07065 602 aaKnown RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 PLCXD2Q0VAA5 305 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PON3Q15166 354 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 CYP1B1Q16678 543 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PGGHGQ32M88 737 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 C4orf46Q504U0 113 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 TMEM35AQ53FP2 167 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PAGE2BQ5JRK9 111 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 NCMAPQ5T1S8 102 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 C1QTNF12Q5T7M4 302 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 AGAP6Q5VW22 663 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PPP4R4Q6NUP7 873 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 ZNF793Q6ZN11 406 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 DGAT2L6Q6ZPD8 337 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 SLCO4C1Q6ZQN7 724 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 GSTA5Q7RTV2 222 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 ZNF572Q7Z3I7 529 aaPredicted RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 DTX2Q86UW9 622 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 GPSM1Q86YR5 675 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PLCZ1Q86YW0 608 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 GALNT12Q8IXK2 581 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 DEPDC4Q8N2C3 294 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 LRRC57Q8N9N7 239 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 STEAP2Q8NFT2 490 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 FNDC9Q8TBE3 224 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 RAB3IL1Q8TBN0 382 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 ZFAND2BQ8WV99 257 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 FIG4Q92562 907 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PROX1Q92786 737 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 MRRFQ96E11 262 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms