RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 STX4Q12846 297 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 PUM1Q14671 1186 aaKnown RBP eCLIP27.24■■□□□ 1.956e-18■■□□□ 12.7
CTDNEP1-208ENST00000573600 GPR135Q8IZ08 494 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 TMEFF2Q9UIK5 374 aaPredicted RBP27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 TESMINQ9Y4I5 508 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 U3KQA8 63 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 CPED1A4D0V7 1026 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 EME2A4GXA9 379 aaPredicted RBP27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 RECKO95980 971 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 GNAO1P09471 354 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 SPIBQ01892 262 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 GUSBP11Q6P575 273 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC23A3Q6PIS1 610 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC16A11Q8NCK7 471 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 OR51Q1Q8NH59 317 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC9A6Q92581 669 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 NAT6Q93015 286 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 FBXL20Q96IG2 436 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 NUDT22Q9BRQ3 303 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 RBCK1Q9BYM8 510 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 SERTAD3Q9UJW9 196 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 ADAMTS9Q9P2N4 1935 aa27.23■■□□□ 1.95
CTDNEP1-208ENST00000573600 MYOCOSA0A1B0GUC4 107 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 A8MU76 341 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 IGFBP5P24593 272 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 HSD17B7P56937 341 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 HPCAP84074 193 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 MAP4K2Q12851 820 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 BIKQ13323 160 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 YOD1Q5VVQ6 348 aaPredicted RBP27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 KDM4DQ6B0I6 523 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZNF605Q86T29 641 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 CDRT4Q8N9R6 151 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 BARD1Q99728 777 aaKnown RBP27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC38A1Q9H2H9 487 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 PIGUQ9H490 435 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 TRIM45Q9H8W5 580 aaPredicted RBP27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 FANCEQ9HB96 536 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 ADAP2Q9NPF8 381 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 FAM118AQ9NWS6 357 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 CDC14AQ9UNH5 594 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 DSPPQ9NZW4 1301 aa27.22■■□□□ 1.95
CTDNEP1-208ENST00000573600 CASC3O15234 703 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 TRIM61Q5EBN2 209 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 EXOSC6Q5RKV6 272 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 OR1L3Q8NH93 324 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 RBM18Q96H35 190 aaKnown RBP27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 PINK1Q9BXM7 581 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 UNC13CQ8NB66 2214 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 ARHGAP33O14559 1287 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 COQ9O75208 318 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 SOX30O94993 753 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 SYPP08247 313 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 ALOX5P09917 674 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 FOLR1P15328 257 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 CDH2P19022 906 aaPredicted RBP27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 DAPP51397 102 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 SYT16Q17RD7 645 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 ARHGAP11BQ3KRB8 267 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 PERM1Q5SV97 790 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 ANKRD34AQ69YU3 496 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 TTLL10Q6ZVT0 673 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 CYP4Z1Q86W10 505 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 METTL27Q8N6F8 245 aaPredicted RBP27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZBTB44Q8NCP5 570 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 CDS1Q92903 461 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 MBOAT4Q96T53 435 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 STACQ99469 402 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 DPYSL5Q9BPU6 564 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 KIF17Q9P2E2 1029 aa27.21■■□□□ 1.95
CTDNEP1-208ENST00000573600 CPNE6O95741 557 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 ALPPP05187 535 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 CT62P0C5K7 136 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 ACP2P11117 423 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 YAP1P46937 504 aaKnown RBP27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 GCGRP47871 477 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 HMGA2P52926 109 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 CDH12P55289 794 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 LAPTM4AQ15012 233 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 FAHD1Q6P587 224 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 MED25Q71SY5 747 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 GALNT12Q8IXK2 581 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 VWA5B2Q8N398 1253 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 EID2Q8N6I1 236 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 SIMC1Q8NDZ2 872 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR4C15Q8NGM1 316 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 GIPC3Q8TF64 312 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 NDC1Q9BTX1 674 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 ALOXE3Q9BYJ1 711 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 SOX17Q9H6I2 414 aaPredicted RBP27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 CXorf21Q9HAI6 301 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 DUSP22Q9NRW4 184 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 SLC9A8Q9Y2E8 581 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 MYRFQ9Y2G1 1151 aa27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 TMEM184BQ9Y519 407 aaPredicted RBP27.2■■□□□ 1.94
CTDNEP1-208ENST00000573600 SPTBP11277 2137 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 PATE3B3GLJ2 98 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 ZNF749O43361 778 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 JRKO75564 520 aa27.19■■□□□ 1.94
CTDNEP1-208ENST00000573600 ANKRD34CP0C6C1 535 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms