RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TRIP6Q15654 476 aaKnown RBP9.51□□□□□ -0.89
SMG6-213ENST00000573166 SYT16Q17RD7 645 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 LGI4Q8N135 537 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 TNFRSF12AQ9NP84 129 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 DDX28Q9NUL7 540 aaKnown RBP9.51□□□□□ -0.89
SMG6-213ENST00000573166 RHCGQ9UBD6 479 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 MIA3Q5JRA6 1907 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 CROCCQ5TZA2 2017 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 PGRMC2O15173 223 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 CTNSO60931 367 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 ZFAND5O76080 213 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 TNFSF15O95150 251 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 FESP07332 822 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 PTNP21246 168 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 MAOAP21397 527 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 LGALS3BPQ08380 585 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SNTA1Q13424 505 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 TAF13Q15543 124 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 UGT8Q16880 541 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 VWA2Q5GFL6 755 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SMARCD3Q6STE5 483 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 Q96MT0 163 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 ERVMER34-1Q9H9K5 563 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 RASSF1Q9NS23 344 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 C14orf105Q9NVL8 296 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SLC22A7Q9Y694 548 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 IGHV5-51A0A0C4DH38 117 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 TRBV11-1A0A0K0K1C0 115 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 NSA2O95478 260 aaKnown RBP9.51□□□□□ -0.89
SMG6-213ENST00000573166 THRBP10828 461 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 ENDOUP21128 410 aaKnown RBP9.51□□□□□ -0.89
SMG6-213ENST00000573166 LIM2P55344 173 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 UGT3A2Q3SY77 523 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 CRB2Q5IJ48 1285 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 FAM91A1Q658Y4 838 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SLC48A1Q6P1K1 146 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SFTPA2Q8IWL1 248 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SLC22A18ASQ8N1D0 253 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 GALNT15Q8N3T1 639 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 FAM81AQ8TBF8 368 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 TMEM234Q8WY98 164 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 ADOQ96SZ5 270 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 NRTNQ99748 197 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 MTHFD2LQ9H903 347 aaPredicted RBP9.51□□□□□ -0.89
SMG6-213ENST00000573166 WWP2O00308 870 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 AHSA1O95433 338 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 WNT1P04628 370 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 ANXA8P13928 327 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 CDK9P50750 372 aaKnown RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 XKR7Q5GH72 579 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 C6orf15Q6UXA7 325 aaPredicted RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 COMMD2Q86X83 199 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 SVOPLQ8N434 492 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 DNASE2BQ8WZ79 361 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 EPYCQ99645 322 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 SPATA9Q9BWV2 254 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 OSBPL11Q9BXB4 747 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 THSD1Q9NS62 852 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 AP4B1Q9Y6B7 739 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 BDP1A6H8Y1 2624 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 PLD2O14939 933 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 TNFSF14O43557 240 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 TMPRSS11DO60235 418 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 GALR3O60755 368 aaPredicted RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 JRKO75564 520 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 MT-CO3P00414 261 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 PLGP00747 810 aaPredicted RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 PSMB9P28065 219 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 S100A5P33763 92 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 PPP1CAP62136 330 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 MRPS15P82914 257 aaKnown RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 LTB4RQ15722 352 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 ZNF750Q32MQ0 723 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 YOD1Q5VVQ6 348 aaPredicted RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 JAZF1Q86VZ6 243 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 OR8J2Q8NGG1 315 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 OR5K1Q8NHB7 308 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 WDR20Q8TBZ3 569 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 STT3BQ8TCJ2 826 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 DOHHQ9BU89 302 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 NPLQ9BXD5 320 aaPredicted RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 LIN28AQ9H9Z2 209 aaKnown RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 CMTM6Q9NX76 183 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 USE1Q9NZ43 259 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 SLAMF8Q9P0V8 285 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 SH2B3Q9UQQ2 575 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 MYRFQ9Y2G1 1151 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 MED31Q9Y3C7 131 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 MMACHCQ9Y4U1 282 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 ARID1BQ8NFD5 2236 aaPredicted RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 PIKFYVEQ9Y2I7 2098 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 TNFAIP8O95379 198 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 CHN2P52757 468 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 HSD17B7P56937 341 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 TXNL4AP83876 142 aaKnown RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 ZCCHC7Q8N3Z6 543 aaKnown RBP9.5□□□□□ -0.89
SMG6-213ENST00000573166 GALNT6Q8NCL4 622 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 OR14A16Q8NHC5 309 aa9.5□□□□□ -0.89
SMG6-213ENST00000573166 CREB3L4Q8TEY5 395 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms