RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PRLRP16471 622 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 MSNP26038 577 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 CTNNA1P35221 906 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 ACTN2P35609 894 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PPARGP37231 505 aaPredicted RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 CDKN2BP42772 138 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 RXRGP48443 463 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 NOVA1P51513 510 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 METAP1P53582 386 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ATP12AP54707 1039 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 DCAF7P61962 342 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 HNRNPKP61978 463 aaKnown RBP eCLIP3.66□□□□□ -1.82
NUP88-202ENST00000570937 DYNLT1P63172 113 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 IFI35P80217 286 aaPredicted RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 GBE1Q04446 702 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PPIDQ08752 370 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 XRCC4Q13426 336 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PEX6Q13608 980 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 CRYMQ14894 314 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 TMEM52BQ4KMG9 183 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ARMC12Q5T9G4 340 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 SEL1L3Q68CR1 1132 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 TXNRD3NBQ6F5E7 133 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 Q6ZSR6 202 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 IKBIPQ70UQ0 350 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 TRPT1Q86TN4 253 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 NT5DC3Q86UY8 548 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PARGQ86W56 976 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PQLC3Q8N755 202 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 STPG4Q8N801 248 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 DENND6BQ8NEG7 585 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 GSDMBQ8TAX9 411 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 MOAP1Q96BY2 351 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ECHDC3Q96DC8 303 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 OXNAD1Q96HP4 312 aaPredicted RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 LGMNQ99538 433 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 WRAP53Q9BUR4 548 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 GRPEL1Q9HAV7 217 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 NT5MQ9NPB1 228 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 SCRT2Q9NQ03 307 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ETNK2Q9NVF9 386 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 SEPT10Q9P0V9 454 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 LHX3Q9UBR4 397 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 B3GALT5Q9Y2C3 310 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 CMAHPQ9Y471 501 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ZNF292O60281 2723 aa3.65□□□□□ -1.82
NUP88-202ENST00000570937 THADAQ6YHU6 1953 aa3.65□□□□□ -1.82
NUP88-202ENST00000570937 SPTY2D1-AS1A0A0U1RR47 76 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 A0A1B0GTQ1 180 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 A0A1W2PR77 199 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 RGSL1A5PLK6 1076 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CDRT15L2A8MXV6 281 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 C10orf142B7Z368 130 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 H7C0C1 242 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 J3QR06 171 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 APOC4-APOC2K7ER74 178 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 KCNK1O00180 336 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PSMD11O00231 422 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CACNB4O00305 520 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 TRAFD1O14545 582 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 ZW10O43264 779 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ZSCAN12O43309 604 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 MFSD11O43934 449 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 SH3BP5O60239 455 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 GJB3O75712 270 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ANXA9O76027 345 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 RECQL5O94762 991 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 PGLSO95336 258 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 BMP10O95393 424 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 LDOC1O95751 146 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 TSHBP01222 138 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 EPOP01588 193 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 APOC2P02655 101 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 LIPFP07098 398 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 HOXC4P09017 264 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 ALPIP09923 528 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CD59P13987 128 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CTSEP14091 401 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ZNF30P17039 623 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 GABRB1P18505 474 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 STIP1P31948 543 aaKnown RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 ATP5OP48047 213 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CAMPP49913 170 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 DUSP3P51452 185 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 MMP15P51511 669 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 HILS1P60008 231 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 MAXP61244 160 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PPARDQ03181 441 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ILKQ13418 452 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PRPSAP1Q14558 356 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ELOCQ15369 112 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 RPS6KA1Q15418 735 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 TAZQ16635 292 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 MEP1AQ16819 746 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ZNF876PQ49A33 203 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 TEX44Q53QW1 395 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ZDHHC20Q5W0Z9 365 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 TMEM198Q66K66 360 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ITPRIPL1Q6GPH6 555 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms