RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 MFSD12Q6NUT3 480 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 TRMT10BQ6PF06 316 aaKnown RBP6.42□□□□□ -1.38
SMG6-205ENST00000570659 C12orf54Q6X4T0 127 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 SLC29A4Q7RTT9 530 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 PEX26Q7Z412 305 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 GGNQ86UU5 652 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 DTX2Q86UW9 622 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 IFNEQ86WN2 208 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 ST13P4Q8IZP2 240 aaPredicted RBP6.42□□□□□ -1.38
SMG6-205ENST00000570659 CCDC89Q8N998 374 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 C10orf105Q8TEF2 133 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 RNF138Q8WVD3 245 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 RIT1Q92963 219 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 FBXW5Q969U6 566 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 NXNL1Q96CM4 212 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 OMA1Q96E52 524 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 C11orf24Q96F05 449 aaPredicted RBP6.42□□□□□ -1.38
SMG6-205ENST00000570659 SFXN2Q96NB2 322 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 SERPINB12Q96P63 405 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 NAP1L3Q99457 506 aaPredicted RBP6.42□□□□□ -1.38
SMG6-205ENST00000570659 DESI2Q9BSY9 194 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 RPF2Q9H7B2 306 aaKnown RBP6.42□□□□□ -1.38
SMG6-205ENST00000570659 FOLH1BQ9HBA9 442 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 RNF115Q9Y4L5 304 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 ARFGEF3Q5TH69 2177 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 NOTCH1P46531 2555 aa6.42□□□□□ -1.38
SMG6-205ENST00000570659 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 VWC2LB2RUY7 222 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 AKR1B15C9JRZ8 316 aaPredicted RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 E7EQL1 145 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 UBFD1O14562 309 aaKnown RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 TP53I11O14683 189 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 WISP3O95389 354 aaPredicted RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 GPR75O95800 540 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 HIST1H2AGP0C0S8 130 aaPredicted RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 CCDC175P0C221 793 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 HIST1H2ADP20671 130 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 SHC1P29353 583 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 HSPA7P48741 367 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 NAP1L1P55209 391 aaKnown RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 RPS13P62277 151 aaKnown RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 IRF9Q00978 393 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 PLIN5Q00G26 463 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 PCDH1Q08174 1060 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 OR4D1Q15615 310 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 LTB4RQ15722 352 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 ETFDHQ16134 617 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 HP1BP3Q5SSJ5 553 aaPredicted RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 CYB5R2Q6BCY4 276 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 NPSR1Q6W5P4 371 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 P4HA3Q7Z4N8 544 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 OR4N2Q8NGD1 307 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 TAF15Q92804 592 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMG6-205ENST00000570659 CAVIN3Q969G5 261 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 WDR34Q96EX3 536 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 HIST1H2AHQ96KK5 128 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 KRT12Q99456 494 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 HIST1H2AJQ99878 128 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 H2AFJQ9BTM1 129 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 CACNG6Q9BXT2 260 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 OR10A5Q9H207 317 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 CCDC68Q9H2F9 335 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 C12orf49Q9H741 205 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 NT5DC2Q9H857 520 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 METTL7AQ9H8H3 244 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 COPS7BQ9H9Q2 264 aaPredicted RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 PLSCR4Q9NRQ2 329 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 PROCRQ9UNN8 238 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 EPN1Q9Y6I3 576 aaPredicted RBP6.41□□□□□ -1.38
SMG6-205ENST00000570659 KCNE2Q9Y6J6 123 aa6.41□□□□□ -1.38
SMG6-205ENST00000570659 A0A0A6YYD5 115 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 A0A1W2PP18 115 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 SERINC4A6NH21 518 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 ANKDD1BA6NHY2 528 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 CBR3O75828 277 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 CBX7O95931 251 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 PTMAP06454 111 aaKnown RBP6.4□□□□□ -1.38
SMG6-205ENST00000570659 CRHP06850 196 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 ZNF37AP17032 561 aaPredicted RBP6.4□□□□□ -1.38
SMG6-205ENST00000570659 CHMP24386 653 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 SRD5A2P31213 254 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 BSGP35613 385 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 CASP2P42575 452 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 SSR2P43308 183 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 RGS4P49798 205 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 NUDT6P53370 316 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 CORO7P57737 925 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 IL2P60568 153 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 TBL3Q12788 808 aaKnown RBP6.4□□□□□ -1.38
SMG6-205ENST00000570659 CRYMQ14894 314 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 SF3B4Q15427 424 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMG6-205ENST00000570659 CR1LQ2VPA4 569 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 FAM214BQ7L5A3 538 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 NUFIP2Q7Z417 695 aaKnown RBP6.4□□□□□ -1.38
SMG6-205ENST00000570659 GPR180Q86V85 440 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 PLCZ1Q86YW0 608 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 TMEM139Q8IV31 216 aa6.4□□□□□ -1.38
SMG6-205ENST00000570659 DND1Q8IYX4 353 aaKnown RBP6.4□□□□□ -1.38
SMG6-205ENST00000570659 TAGAPQ8N103 731 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms