RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 DTD2Q96FN9 168 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 COQ10AQ96MF6 247 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 TREX2Q9BQ50 279 aaPredicted RBP20.38■□□□□ 0.85
SPSB3-208ENST00000566339 BTBD1Q9H0C5 482 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 SPNS1Q9H2V7 528 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 SLAMF7Q9NQ25 335 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 WASH6PQ9NQA3 447 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 PRKAG2Q9UGJ0 569 aa20.38■□□□□ 0.85
SPSB3-208ENST00000566339 PRR23AA6NEV1 266 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 AKAP8O43823 692 aaKnown RBP20.37■□□□□ 0.85
SPSB3-208ENST00000566339 SOD1P00441 154 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 EPHX1P07099 455 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 DRD2P14416 443 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 CCT3P49368 545 aaKnown RBP20.37■□□□□ 0.85
SPSB3-208ENST00000566339 RRAS2P62070 204 aaPredicted RBP20.37■□□□□ 0.85
SPSB3-208ENST00000566339 RPA4Q13156 261 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 Q5BKY6 102 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 ARSIQ5FYB1 569 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 IER5LQ5T953 404 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 ACSM5Q6NUN0 579 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 CNIH2Q6PI25 160 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 PDZD3Q86UT5 571 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 NUDT13Q86X67 352 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 SFXN5Q8TD22 340 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 SLC35G5Q96KT7 338 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 PINK1Q9BXM7 581 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 MVB12BQ9H7P6 319 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 PTTG3PQ9NZH4 202 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 KLF15Q9UIH9 416 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 BOLA1Q9Y3E2 137 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 ALG5Q9Y673 324 aa20.37■□□□□ 0.85
SPSB3-208ENST00000566339 FAM240BA0A1B0GVZ2 78 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 CASKO14936 926 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 KIAA0355O15063 1070 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 CCNYL3P0C7X3 344 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 DDX6P26196 483 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■■■□ 26.3
SPSB3-208ENST00000566339 ARFIP1P53367 373 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 TSPAN31Q12999 210 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 IKZF1Q13422 519 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 BHLHB9Q6PI77 547 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 WDR53Q7Z5U6 358 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 ADGRF3Q8IZF5 1079 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 ARIH2OSQ8N7S6 290 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 MOAP1Q96BY2 351 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 HYLS1Q96M11 299 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 ATF6BQ99941 703 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 RSPO3Q9BXY4 272 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 FOLH1BQ9HBA9 442 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 MAN2C1Q9NTJ4 1040 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 CBLCQ9ULV8 474 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 EXOGQ9Y2C4 368 aaKnown RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 A0A0G2JPF8 293 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 LINC00854A0A1B0GVQ3 168 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 HNRNPCL2B2RXH8 293 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 HNRNPCL3B7ZW38 293 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 UBXN7O94888 489 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 HNRNPCL4P0DMR1 293 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 TGM4P49221 684 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 MAN2A2P49641 1150 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 P2RX3P56373 397 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 FABP5Q01469 135 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 ADAM15Q13444 863 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 ZNF782Q6ZMW2 699 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 TRILQ7L0X0 811 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 C17orf64Q86WR6 236 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 SUN3Q8TAQ9 357 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 SMG7Q92540 1137 aaKnown RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 KCTD12Q96CX2 325 aaKnown RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 TRIM45Q9H8W5 580 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-208ENST00000566339 STMN3Q9NZ72 180 aa20.36■□□□□ 0.85
SPSB3-208ENST00000566339 FGBP02675 491 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 LRG1P02750 347 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 LIMS3P0CW19 117 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 LIMS4P0CW20 117 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 PBLDP30039 288 aaPredicted RBP20.35■□□□□ 0.85
SPSB3-208ENST00000566339 PIN1Q13526 163 aaPredicted RBP20.35■□□□□ 0.85
SPSB3-208ENST00000566339 WSCD2Q2TBF2 565 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 CCDC58Q4VC31 144 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 GET4Q7L5D6 327 aaPredicted RBP20.35■□□□□ 0.85
SPSB3-208ENST00000566339 IQCHQ86VS3 1027 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 RBM45Q8IUH3 476 aaKnown RBP20.35■□□□□ 0.85
SPSB3-208ENST00000566339 IQCF1Q8N6M8 205 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 ANKK1Q8NFD2 765 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 TOR1AIP2Q8NFQ8 470 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 OR2L2Q8NH16 312 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 OTULINQ96BN8 352 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 MRGPRX3Q96LB0 322 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 LIPT1Q9Y234 373 aa20.35■□□□□ 0.85
SPSB3-208ENST00000566339 NUP210Q8TEM1 1887 aaPredicted RBP20.34■□□□□ 0.85
SPSB3-208ENST00000566339 VEGFDO43915 354 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 B4GALT2O60909 372 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 EFCAB14O75071 495 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 CSF2P04141 144 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 NR2F1P10589 423 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 LAG3P18627 525 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 HK1P19367 917 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 CD53P19397 219 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 APEX1P27695 318 aaKnown RBP20.34■□□□□ 0.85
SPSB3-208ENST00000566339 IFNA8P32881 189 aa20.34■□□□□ 0.85
SPSB3-208ENST00000566339 SLC1A3P43003 542 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms