RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CCDC90BQ9GZT6 254 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ZCCHC4Q9H5U6 513 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 MTHFD2LQ9H903 347 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 CALHM2Q9HA72 323 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 APMAPQ9HDC9 416 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 MMP25Q9NPA2 562 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 OR2S2Q9NQN1 319 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 RBPJLQ9UBG7 517 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 NAGKQ9UJ70 344 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 PLAGL2Q9UPG8 496 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 NR2E1Q9Y466 385 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 SLCO1B1Q9Y6L6 691 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 A0A1W2PQ67 120 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 A0A1W2PQF6 199 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 F8VP50 259 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 H7C0C1 242 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ITGB1BP1O14713 200 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TMPRSS2O15393 492 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 NUPL2O15504 423 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 OIP5O43482 229 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 XRCC3O43542 346 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CNOT3O75175 753 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 LRCH4O75427 683 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 DFFBO76075 338 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 AP2A2O94973 939 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 LYNP07948 512 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TFPIP10646 304 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CHRNB1P11230 501 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TCP1P17987 556 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 CCNE1P24864 410 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 GKP32189 559 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 PTGER4P35408 488 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CDKN1AP38936 164 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 FEN1P39748 380 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 RGS6P49758 472 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 FLI1Q01543 452 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 MGAT3Q09327 533 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ETFDHQ16134 617 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 RBBP7Q16576 425 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 DUOXA2Q1HG44 320 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ADPRMQ3LIE5 342 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 VPS26BQ4G0F5 336 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 SOWAHCQ53LP3 525 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 YIF1BQ5BJH7 314 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 EOGTQ5NDL2 527 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TSTD2Q5T7W7 516 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 NEPROQ6NW34 567 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TMEM107Q6UX40 140 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TRAPPC5Q8IUR0 188 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CCDC71Q8IV32 467 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 UBALD2Q8IYN6 164 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 BEND7Q8N7W2 519 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 TXNDC5Q8NBS9 432 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 OR5D18Q8NGL1 313 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ST8SIA1Q92185 356 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 SLC38A4Q969I6 547 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 RMND5BQ96G75 393 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 TIMD4Q96H15 378 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 RNF170Q96K19 258 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 FAM84BQ96KN1 310 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 C9orf72Q96LT7 481 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 C10orf90Q96M02 699 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TAAR6Q96RI8 345 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ADAM2Q99965 735 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CEP41Q9BYV8 373 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ANKRD60Q9BZ19 345 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 SIK2Q9H0K1 926 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CLMPQ9H6B4 373 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 DHX33Q9H6R0 707 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 ACSS3Q9H6R3 686 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TDRD3Q9H7E2 651 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 VIPAS39Q9H9C1 493 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 XPNPEP1Q9NQW7 623 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ING3Q9NXR8 418 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 WSB2Q9NYS7 404 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 ACSL6Q9UKU0 697 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CLEC4EQ9ULY5 219 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 CA5BQ9Y2D0 317 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 PRUNE2Q8WUY3 3088 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 FRMPD4Q14CM0 1322 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 C5orf60A6NFR6 353 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NEMP2A6NFY4 417 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SDHDO14521 159 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RFXANKO14593 260 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NRP1O14786 923 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LCMT2O60294 686 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 VAMP5O95183 116 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 OCM2P0CE71 109 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CCDC166P0CW27 439 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FCGR2AP12318 317 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 INSRRP14616 1297 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ITGB5P18084 799 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 WARSP23381 471 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 HOXA7P31268 230 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 GEMP55040 296 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CKAP4Q07065 602 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 CDH18Q13634 790 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LY6KQ17RY6 165 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CDONQ4KMG0 1287 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LIPJQ5W064 366 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms