RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 BCAP29Q9UHQ4 241 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 FREM3P0C091 2139 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 HIVEP1P15822 2718 aa11.15□□□□□ -0.63
GTF3C1-204ENST00000564664 A0A1W2PS29 197 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 SERTM1A2A2V5 107 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 CD8B2A6NJW9 211 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 H3BQF6 201 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 MANBAO00462 879 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 PPP6CO00743 305 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 CBR3O75828 277 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 SUPT7LO94864 414 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ZWINTO95229 277 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ENO1P06733 434 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ATP5F1P24539 256 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 FEN1P39748 380 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 KIR2DL3P43628 341 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 TRPC1P48995 793 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 PRKAA2P54646 552 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 PKNOX1P55347 436 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 DLX5P56178 289 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 RIPPLY3P57055 190 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 EEF1A1P68104 462 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 HEPACAMQ14CZ8 416 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ACSF3Q4G176 576 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 UNC50Q53HI1 259 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 SPIN4Q56A73 249 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 TEX35Q5T0J7 233 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 EEF1A1P5Q5VTE0 462 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 FNDC7Q5VTL7 733 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 NSUN5P2Q63ZY6 315 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 SCIMPQ6UWF3 145 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 TMEM64Q6YI46 380 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 GPRIN3Q6ZVF9 776 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 WDR53Q7Z5U6 358 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 C1orf52Q8N6N3 182 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 CEP112Q8N8E3 955 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 METTL6Q8TCB7 284 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ZPLD1Q8TCW7 415 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 NINJ1Q92982 152 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 HGDQ93099 445 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ABTB1Q969K4 478 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 TMCO6Q96DC7 493 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 CCDC126Q96EE4 140 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 SIRT5Q9NXA8 310 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 DCDC2Q9UHG0 476 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ZNF225Q9UK10 706 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 UTS2RQ9UKP6 389 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 EXO1Q9UQ84 846 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 L3MBTL1Q9Y468 752 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 ARHGAP21Q5T5U3 1957 aa11.14□□□□□ -0.63
GTF3C1-204ENST00000564664 A0A1B0GTL3 188 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 FRG2CA6NGY1 282 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 OR6C70A6NIJ9 312 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 DLX3O60479 287 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 ICOSLGO75144 302 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 OR4F21O95013 312 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 ESRRBO95718 433 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 CBX7O95931 251 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 IL18BPO95998 194 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 CPN1P15169 458 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 BMP7P18075 431 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 PTPN6P29350 595 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 MPIP34949 423 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 OPRM1P35372 400 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 EMDP50402 254 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 ASCL1P50553 236 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 MRPS22P82650 360 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 PLCXD2Q0VAA5 305 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 LCP2Q13094 533 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 TOMM20Q15388 145 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 GALNT18Q6P9A2 607 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 FAM111BQ6SJ93 734 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 SEM1Q6ZVN7 128 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 KIF18BQ86Y91 864 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 HOMEZQ8IX15 550 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 CDYL2Q8N8U2 506 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 OR52R1Q8NGF1 315 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 FAM222BQ8WU58 562 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 RNASE6Q93091 150 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 OMA1Q96E52 524 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 L3HYPDHQ96EM0 354 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 CNRIP1Q96F85 164 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 STMN4Q9H169 189 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 GIMAP4Q9NUV9 329 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 EHD3Q9NZN3 535 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 TMEM216Q9P0N5 145 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 GPR55Q9Y2T6 319 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 PLLPQ9Y342 182 aa11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 MRPS18CQ9Y3D5 142 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-204ENST00000564664 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 FAM221AA4D161 298 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 SNPHO15079 494 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 RIPK2O43353 540 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 CTAG2O75638 210 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 SLITRK5O94991 958 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms