RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PHC2Q8IXK0 858 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 ZNF444Q8N0Y2 327 aaPredicted RBP3.37□□□□□ -1.87
CHD9-212ENST00000564641 MREGQ8N565 214 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 LINC00301Q8NCQ3 95 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 STKLD1Q8NE28 680 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 ATP8B4Q8TF62 1192 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 CHPT1Q8WUD6 406 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 CHURC1Q8WUH1 139 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 DNAJC9Q8WXX5 260 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 IFT81Q8WYA0 676 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 DNASE1L2Q92874 299 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 ATP6V0A1Q93050 837 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 CHMP6Q96FZ7 201 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 C4orf45Q96LM5 186 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 C1orf147Q96MC9 270 aaPredicted RBP3.37□□□□□ -1.87
CHD9-212ENST00000564641 ZNF558Q96NG5 402 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 CATSPER2Q96P56 530 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 INTS14Q96SY0 518 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 OLFM1Q99784 485 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 CENPKQ9BS16 269 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 PORCNQ9H237 461 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 HSD3B7Q9H2F3 369 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 HEXA-AS1Q9H8Q6 139 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 TUFT1Q9NNX1 390 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 UBAP1Q9NZ09 502 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 TSPAN16Q9UKR8 245 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 RABL2BQ9UNT1 228 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 COMMD3-BMI1R4GMX3 469 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 UNC80Q8N2C7 3258 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 PLXNB2O15031 1838 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 NAV1Q8NEY1 1877 aa3.37□□□□□ -1.87
CHD9-212ENST00000564641 ZNFX1Q9P2E3 1918 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 FRMPD3Q5JV73 1810 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 GTPBP10A4D1E9 387 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 ZNF233A6NK53 670 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SLC33A1O00400 549 aaPredicted RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 ZNF263O14978 683 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 GPRIN2O60269 458 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 DUSP11O75319 330 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 ATP5HO75947 161 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PNPP00491 289 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 TIMP1P01033 207 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 KRT14P02533 472 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PAEPP09466 180 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 HLA-DPA1P20036 260 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 CALB2P22676 271 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 JAK1P23458 1154 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PTPN3P26045 913 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 TMOD1P28289 359 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PDHA2P29803 388 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 CCND3P30281 292 aaPredicted RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 OXTRP30559 389 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 STIP1P31948 543 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 CCT6AP40227 531 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 KHKP50053 298 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 XGP55808 180 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 STX1BP61266 288 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SULT2A1Q06520 285 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 FCHO2Q0JRZ9 810 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PNOCQ13519 176 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 CDH18Q13634 790 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 CYLC2Q14093 348 aaPredicted RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 BTG3Q14201 252 aaPredicted RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 LRRC26Q2I0M4 334 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 CNPY1Q3B7I2 92 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 MS4A18Q3C1V0 323 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 HSP90AA4PQ58FG1 418 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 OR52E8Q6IFG1 317 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 C8orf74Q6P047 294 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SHQ1Q6PI26 577 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 ZNF841Q6ZN19 808 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 OTUD6AQ7L8S5 288 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 ANKRD33Q7Z3H0 272 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PIGWQ7Z7B1 504 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 TLK2Q86UE8 772 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 TUSC5Q8IXB3 177 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 C4orf19Q8IY42 314 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 NDUFAF2Q8N183 169 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 GPD1LQ8N335 351 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SLC37A3Q8NCC5 494 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SPATA4Q8NEY3 305 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 OR7G3Q8NG95 312 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD9-212ENST00000564641 PRCCQ92733 491 aaPredicted RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 LRRC45Q96CN5 670 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 ATXN7L3BQ96GX2 97 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 FAM20AQ96MK3 541 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 XPO6Q96QU8 1125 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 ATP6V0BQ99437 205 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 FEVQ99581 238 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SH3GL1Q99961 368 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 CCDC28BQ9BUN5 200 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 TDRD1Q9BXT4 1180 aaKnown RBP3.36□□□□□ -1.87
CHD9-212ENST00000564641 MID1IP1Q9NPA3 183 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 GDF3Q9NR23 364 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 EXOC1Q9NV70 894 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 NDUFA13Q9P0J0 144 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 ADAM22Q9P0K1 906 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 SELENOKQ9Y6D0 94 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms